Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g1438 ATGGAAAAGAAGGGAAAAATCATAGTATCAGTAGTTGTTTCACTTTCGCTCATCCTTGTGGCGGGAGTTGCCACCGGGATCATCGTGGCCGTTAATAACAAGAAAAGCAATGGCGCTGATGAAGTGCAAAACACTAAAGAAAGGTTCACGAGTCTCATTTGCCGTAACACACAAGAGAATCAAAACCTCTGTCGCGAGGTTCTAAGCCAAGTTGATGGTTCCTCTTCTTCCGACCTGAAAGCATACATCGATGCCGCTGTGAACGATATCAGAGATGGCGTCACCACCGCCCTAAAGATGATGATGACTGAGGAGGAGTTCTCCAAAGATGACAATGGAATCAAGATGGCCATTGATGGTTGCAAAGAAGTTATGGAGTCCGCATTGAGCAGCCTCGACCTTTTCAGCAATGTGCTTCGCAGCAATCACGACATTAACTCCCTGCAACCGCAAATCCCCGACCTCAAGAACTGGCTTAGCGCCGTTATCTCATATCAGCAATCTTGTATTAACATTTTTGAGGATCAAAATAAAGGAGAGAGAAAAATCAAAGAACAACTACAAAGCCTGAGTTTGGATCGTGTTGAGAAGGTTTCCATCATAACTCTTGATATTGTTACTGGTTTGGCTAAGATCATTGAAGATCTTGGCCTGCATGTGGAAATGAAACCCATTGCTTCTTCTGGGCGTGTTCTTCGCGAAGAGGTTGATAACGAGGGGTTCCCCGATTGGTTTTCCTCTTCAGATCGTAAGCTGTTGGCGAAGGATGTGAAGTTTCATGTTCCAAATGTAGTGGTTGCTAAAGATGGTAGTGGAAATTTTAGGACGGTTCAGGATGCAATTAACTCGTACCCAAAGGCAAAGAGTTTTCAGGAAAGGTACATTATCTATGTTAAGGCGGGGATTTATAAGGAGAATTGTACAGTTCCATCTTATGCAATGAACATTTTCATGTATGGTGATGGCCCTACTAAGACCATTATCACTGCTAGTATGAGCAATGTCACCCATAACCTCAAGGCCATGTTTACTGCCACTTTCGTGAATAAAGCGGGAATGTTTCTTGCGAAGGACATGAGGTTCGAGAATGCAGCTGGAGATTTTTCAGCTTTTTATAACTGCCACATACACGATTATCAGTTGTATGTTCAAGCCAATAGACAATTCTATCGCAACTGCGAAATTACTGGAACAGTTGACTTTATCTTCGGTACATCTCCTGCCGTGATCCAGAGAAGCAAGCTCATCGTGAGGATGCCCTTGCCAACTCAGTTCATTGTGTTGGTCGCAGATGACACCGTCGAGAGGAACATGACTACTGGCATTGTGATTCAGGAATGCCAGATTGTTCCCGATTCAATGTTTGACTCGGTCAAATACCAAATCAAGACTTATTTGGGTAGGCCATGGAAGGAAGGATCGAGAGCAGTAATTATGGAATCATATCTGAGTGATTGGATTAATCCGGAAGGGTGGGCCCCTCATGCTGGCAATGAGATAAAAGGCTTCTTAGATATTTGTGAGTATGGAAATACCGGACCAGCTGCTTCAGTTTATGGAAGAATCAAGTGGAAGGGATATCGTGGTATAATAACTAAGAATGAAGCCATGCGATTCACTGTTGCTGAATTCCTCAAGGGTGGACCTAACAATAATGCTGACCAATGGTTGAACGCTCTTGGTGTTCCTTTTGAAAGTGGTTTTGTAAGGCCGTAA 1716 0.4353 MEKKGKIIVSVVVSLSLILVAGVATGIIVAVNNKKSNGADEVQNTKERFTSLICRNTQENQNLCREVLSQVDGSSSSDLKAYIDAAVNDIRDGVTTALKMMMTEEEFSKDDNGIKMAIDGCKEVMESALSSLDLFSNVLRSNHDINSLQPQIPDLKNWLSAVISYQQSCINIFEDQNKGERKIKEQLQSLSLDRVEKVSIITLDIVTGLAKIIEDLGLHVEMKPIASSGRVLREEVDNEGFPDWFSSSDRKLLAKDVKFHVPNVVVAKDGSGNFRTVQDAINSYPKAKSFQERYIIYVKAGIYKENCTVPSYAMNIFMYGDGPTKTIITASMSNVTHNLKAMFTATFVNKAGMFLAKDMRFENAAGDFSAFYNCHIHDYQLYVQANRQFYRNCEITGTVDFIFGTSPAVIQRSKLIVRMPLPTQFIVLVADDTVERNMTTGIVIQECQIVPDSMFDSVKYQIKTYLGRPWKEGSRAVIMESYLSDWINPEGWAPHAGNEIKGFLDICEYGNTGPAASVYGRIKWKGYRGIITKNEAMRFTVAEFLKGGPNNNADQWLNALGVPFESGFVRP* 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g1438 571 CDD PMEI-like_3 52 211 - -
Amo14g1438 571 Gene3D Invertase/pectin methylesterase inhibitor family protein 47 210 IPR035513 -
Amo14g1438 571 SMART PMEI_2 45 205 IPR006501 GO:0004857
Amo14g1438 571 PANTHER PECTINESTERASE 12 568 - -
Amo14g1438 571 Pfam Pectinesterase 263 547 IPR000070 GO:0030599|GO:0042545
Amo14g1438 571 TIGRFAM PME_inhib: pectinesterase inhibitor domain 39 205 IPR006501 GO:0004857
Amo14g1438 571 Pfam Plant invertase/pectin methylesterase inhibitor 52 204 IPR006501 GO:0004857
Amo14g1438 571 PANTHER PECTINESTERASE 12 568 - -
Amo14g1438 571 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 53 199 IPR035513 -
Amo14g1438 571 ProSitePatterns Pectinesterase signature 2. 395 404 IPR033131 -
Amo14g1438 571 SUPERFAMILY Pectin lyase-like 263 565 IPR011050 -
Amo14g1438 571 Gene3D - 259 568 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g1438 Amo-Chr14 24478537 24480682 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo14g1438 54 568 Carbohydrate Esterase AT4G33230 34.953 2.25e-94 299
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g1438 K01051 - gmx:100815015 532.332