Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g1422 ATGCAGCGACTGAAGACTATGATGGGCTCCCGCGACTACATCCAAGCATTGGAACATGAACGCCGCAAGATTCAGGTCTTCTCCAAAGAGCTTCCTCTTTCCTTGGACCTCGTCACACAAGCCATTGAAGCGTGCAGGCAGCAGTTGTCTGAGACGACGACGGAGTACAACATGAACGGACACAATTCGGAGTGTTCGGAGCAGACAACGTCAACCGACAACGGTCCTGTCTTGGAGGAGTTCATCCCAATTAAGAAGAGACCATCATCTCCACATGAAGAAGAAGAAGATGATGATGACGATGAACAACATTCCCATCATCATCGCCACAAGATCTCGAAGGATAACACTGATAAGAGGAAATCAGATTGGCTTAGATCCGTTCAGTTGTGGAATAATCCAGAACCCTCATCACCACCTCATCAGGAGGTGAACAATAAGAAAGGCGGTGCGGTGGAAGTGAAGAGAAGTGGAAGTGGTGGTGCTTTTCAGCCATTTCACAAGGAGAAGGAGGAAAGAGTAGGTGGTGGTGGCGCCAAGGCAATTGCAAGTGATGATCTGAGACCACCGTGTTCCTCCAACAGCAGCAAGAAGGAAGAGAAAGAGGGGCAGAGGAAGCAGCGCCGTTGCTGGTCTCAGGAGTTGCACAAACGATTCTTGCAAGCCCTTCAACAACTTGGAGGCCCTGATTCTGCCACACCGAAGCAAATCAGGGAGCTTATGAAAGTTGATGGCCTCACTAATGACGAAGTCAAAAGCCATTTACAGAAATACCGGTTACACACTAGAAGACCTAGTGGCATAGTTCACAACAATGGCAGTCCACAAACGACGCCGTTTGTCCTAGTAGGCAACATTTTTGTTCAACCGCCAGAATATGCCGCAGCGGCCGTGGCCACGTCAGCAGATCTAGCACCTGCCGGAATATATGCGCCTGTAGCCACGCATCCTCCTCCACCTCCTCCCCGGACGGCGGCTGGTTCCACTAGAAGACCGCAGTTGAAGAAATCATCAAACCACATGCGTGAAGATCATCATCATTCACACTCGGAAGAAGATAGGGCTAATCATTCAAACTCTCCAGCTTCATCATCATCCACACACACCACCACAACTACTTCCCCTGCCTATTGA 1134 0.4974 MQRLKTMMGSRDYIQALEHERRKIQVFSKELPLSLDLVTQAIEACRQQLSETTTEYNMNGHNSECSEQTTSTDNGPVLEEFIPIKKRPSSPHEEEEDDDDDEQHSHHHRHKISKDNTDKRKSDWLRSVQLWNNPEPSSPPHQEVNNKKGGAVEVKRSGSGGAFQPFHKEKEERVGGGGAKAIASDDLRPPCSSNSSKKEEKEGQRKQRRCWSQELHKRFLQALQQLGGPDSATPKQIRELMKVDGLTNDEVKSHLQKYRLHTRRPSGIVHNNGSPQTTPFVLVGNIFVQPPEYAAAAVATSADLAPAGIYAPVATHPPPPPPRTAAGSTRRPQLKKSSNHMREDHHHSHSEEDRANHSNSPASSSSTHTTTTTSPAY* 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g1422 377 MobiDBLite consensus disorder prediction 336 356 - -
Amo14g1422 377 MobiDBLite consensus disorder prediction 192 210 - -
Amo14g1422 377 SUPERFAMILY Homeodomain-like 204 264 IPR009057 -
Amo14g1422 377 MobiDBLite consensus disorder prediction 55 76 - -
Amo14g1422 377 MobiDBLite consensus disorder prediction 357 377 - -
Amo14g1422 377 PANTHER MYB-LIKE TRANSCRIPTION FACTOR FAMILY PROTEIN 9 372 - -
Amo14g1422 377 MobiDBLite consensus disorder prediction 126 144 - -
Amo14g1422 377 MobiDBLite consensus disorder prediction 311 377 - -
Amo14g1422 377 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 9 372 IPR044787 GO:0003700|GO:0006355
Amo14g1422 377 Pfam Myb-like DNA-binding domain 208 259 IPR001005 -
Amo14g1422 377 MobiDBLite consensus disorder prediction 312 326 - -
Amo14g1422 377 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 203 263 IPR017930 -
Amo14g1422 377 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 206 261 IPR006447 GO:0003677
Amo14g1422 377 Gene3D - 205 263 - -
Amo14g1422 377 MobiDBLite consensus disorder prediction 55 210 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g1422 Amo-Chr14 24078251 24080530 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo14g1422 1 319 G2-like Transcription Factor Family AT1G68670 45.915 7.71e-80 247
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Amo14g1422 Myb_DNA-binding 4.3e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g1422 - - adu:107468029 642.499