Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g1406 ATGGTGCATGATGACGATGAAGCTGATGATGAAACATTTGCTTCACATGCTGATGAATATGCAAAAAACAGAGATGTTCCATCTAGTGCTGCTCTACCAATTATACGACCAGCCTTAGGTAGGCAGCAGTCTGTGTCAGACAGGGCAAAGAGTGCAATGCAAGGATATCTGAATCACTTTTTGGGAAATATCAGTATTGTTAACTCTCCAGAGGTCTGCAAGTTTTTAGAGGTATCGAAGCTATCTTTTTTGCCTGAATATGGACCTAAGCTGAAAGAAGATTATGTAATGGTGAAACATCTGCCCAAAATTCCAAAGGATGATGATTCCAGAAAGTGTTGTACATCTAGCTGTTTTAGTTGTTGTAATGACAACTGGCAAAAGGTATGGGCTGTATTGAAACCTGGATTCTTGGCATTGCTGGCAGATCCTTTTGATAAGCAGCCCTTAGACATTATTGTCTTTGATGTGCTGCCTCCATCGGATGGGAATGGGGATGGTCGTCTGTCACTGGCTAGTGAAATAAAGGAACGAAATCCTTTACGCCATTCATTCAAGGTGACMTGCGGMATCCGGAGCATTAGAATTAGAGGGAAAAGTAGCAGTAAAGTTAAAGATTGGGTWGCAGCAATTAATGATGCTGGACTTAGGCCTCCTGAAGGCTGGTGTTATCCTCACCGCTATGGGTCATTTGCTCCTCCAAGAGGCTTAATTGAAGATGGTAGTCAAGCCCAATGGTTCGTGGATGGGCAAGCAGCATTTGATGCAATTGCTTCTTCAATTGAGGATGCAAGATCAGAGATATTCATCTGTGGATGGTGGGTATGCCCAGAACTGTATCTCAGGCGACCTTTTGACATTCATGCATCATCAAGGCTTGATAATTTGTTGGAAGCAAAGGCTAAGCAAGGGGTTCAGATCTACATTCTTCTGTACAAAGAGGTGGCTCTTGCTTTGAAAATCAACAGTGTCTATAGCAAGAGAAAGCTTCTTAGCATTCATGAGAACGTGAGGGTACTACGCTATCCTGATCACTTTTCTTCTGGTGTTTATCTATGGTCTCACCATGAAAAACTGGTCATTGTCGATAACCATATTTGCTTCATTGGAGGARTGGATTTGTGCTTTGGCCGTTATGACTCATCTGAGCATAAAGTGGGGGATTGCCCTCCTCTAATCTGGCCTGGAAAGGACTTTTATAACCCTAGGGAATCTGAACCTAATTCATGGGAAGATACAATGAAAGATGAATTGGATCGTAGAAATTATCCTCGTATGCCTTGGCATGATGTTCATTGCGCCCTTTGGGGACCACCTTGTCGTGATATTGCTCGGCACTTTGTTCAAAGATGGAATTATGCYAAGAGGAATAAAGCTCCGTATGAGGAAGCAATACCTTTACTTATGCCTCAGCATCATATGGTTATTCCACATTACTTGGGAAGAAGCACTGAGATGGAGATTGAAAACAATAATGCTGAGAATCATAGAGTCATCAAGAGAGAAGATTCATTTTCTTCATTATCCCAAGAACAAGATGTTCCTCTACTTTTGACTCGTGATGAGTCTGAAGGAGACCCCAAAATGAACGGGTTAAACTTCATACATCACGTTGATAAGCCAATAAAGGTCGGTGGTGGTCTTCCTTTCTCTTTTCGGAGGGTGAAAATTGAAGCTGTTGGTCAAGACACCCCAATGAAGGGCTTTGTAGATGATCTTGGATATATGCATTATGATGAGAAAAAGTCTCTGGATAGAGTGCCTCATGTTGAGCAACAAAGTACTGGTCCAGAATGGTGGGAAACACAAGAGCGTGGTGATCAGGGAGATTTTGCAGATGAATCAGGGCAAGTTGGCCCTCGTGTTTCCTGCCGTTGTCAGGTTATTAGGAGCGTCAGTCAATGGTCTGCTGGAACAAGCCAAACGGAAGAGAGCATACACAATGCCTATTGCTCTCTTATTGAAAAAGCAGAARACTTCATCTACATTGAGGTATCAAATGCGCTTCTTCTTTTTACCATATCTCCATAG 2031 0.4234 MVHDDDEADDETFASHADEYAKNRDVPSSAALPIIRPALGRQQSVSDRAKSAMQGYLNHFLGNISIVNSPEVCKFLEVSKLSFLPEYGPKLKEDYVMVKHLPKIPKDDDSRKCCTSSCFSCCNDNWQKVWAVLKPGFLALLADPFDKQPLDIIVFDVLPPSDGNGDGRLSLASEIKERNPLRHSFKVTCGIRSIRIRGKSSSKVKDWVAAINDAGLRPPEGWCYPHRYGSFAPPRGLIEDGSQAQWFVDGQAAFDAIASSIEDARSEIFICGWWVCPELYLRRPFDIHASSRLDNLLEAKAKQGVQIYILLYKEVALALKINSVYSKRKLLSIHENVRVLRYPDHFSSGVYLWSHHEKLVIVDNHICFIGGXDLCFGRYDSSEHKVGDCPPLIWPGKDFYNPRESEPNSWEDTMKDELDRRNYPRMPWHDVHCALWGPPCRDIARHFVQRWNYAKRNKAPYEEAIPLLMPQHHMVIPHYLGRSTEMEIENNNAENHRVIKREDSFSSLSQEQDVPLLLTRDESEGDPKMNGLNFIHHVDKPIKVGGGLPFSFRRVKIEAVGQDTPMKGFVDDLGYMHYDEKKSLDRVPHVEQQSTGPEWWETQERGDQGDFADESGQVGPRVSCRCQVIRSVSQWSAGTSQTEESIHNAYCSLIEKAEXFIYIEVSNALLLFTISP* 677
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g1406 676 PIRSF PLD_euk 477 666 IPR016555 GO:0004630|GO:0006654|GO:0048017
Amo14g1406 676 PIRSF PLD_euk 3 495 IPR016555 GO:0004630|GO:0006654|GO:0048017
Amo14g1406 676 PANTHER PHOSPHOLIPASE D ZETA 2 6 667 - -
Amo14g1406 676 Gene3D Endonuclease Chain A 237 477 - -
Amo14g1406 676 MobiDBLite consensus disorder prediction 1 20 - -
Amo14g1406 676 SUPERFAMILY PH domain-like 122 214 - -
Amo14g1406 676 Gene3D - 116 216 IPR011993 -
Amo14g1406 676 Pfam Phospholipase D Active site motif 351 378 IPR001736 GO:0003824
Amo14g1406 676 PANTHER PHOSPHOLIPASE D 6 667 IPR015679 -
Amo14g1406 676 SMART pld_4 351 378 IPR001736 GO:0003824
Amo14g1406 676 CDD PLDc_vPLD1_2_yPLD_like_1 244 389 - -
Amo14g1406 676 SMART PH_update 90 218 IPR001849 -
Amo14g1406 676 SUPERFAMILY Phospholipase D/nuclease 207 471 - -
Amo14g1406 676 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 351 378 IPR001736 GO:0003824
Amo14g1406 676 CDD PH_PLD 67 214 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g1406 Amo-Chr14 23860512 23867783 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo14g1406 2 664 Phospholipase D Gene Family (Wang group) AT3G16785 71.875 0.0 924
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g1406 K01115 - gmx:100780514 1191.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo14g1406 14 23860512 23867783 Amo14g1406 14 23860512 23867783 ECH
Amo14g1406 14 23860512 23867783 Amo04g0288 04 4866933 4878850 hybridization