Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g1371 ATGGCCATGGCCTTGCATGACCATGTCTTCTTCTACATCTTTGTCATCATCTCCGCCGCGCCATTATCGCTCTCTCAGCCACAAGCCGCCTCCTCCTGCAACGGAATATTCCTTTCTTACACTTACACCAGCGGCTACCGCCTGCCGCCGAACACGTCCGACACCGCGGACCAGCCATACCGGTTCACGTCGGAGCTGACGGTGCTAAACAACGGCCTAGAGGATCTGAAGTCATGGAAGGTGTTCGTGGGTTTCCGGCACCGAGAGTGGCTGGTTTCGGCGTCGAACGCGGAGCTGGCAGACGGCACAGGGCTCCCTGCTGCCGTCGGAAACGGGACAGTTTTGGAGGGGTCCGAGGTGAGGGACTTGAAGACGGCAGCGGAGACGGCGGGGGACTTAAAACAGATGATGGTAACGGTGGACATGGTGGGGACGGTGTTTGGGGTGGCGCCACCCAATGTTCCCATGCCTTCCACCATTAGGCTCTCTAATGAAGGTTTTATTTGTCGTAAACCCACTTCTCAAGCAGGTAACAATGAGACACATACATGTTGCACAGTTGATCCCAATTCCAAAACAAACACACCCACAGATGAACAAGAATTTCCACTCCCTCAGAAAGGTGGTGACCTTAGCATAATCTATGATGTCACAAAAACATATGAATCCAATTACTGGGCAGAGGTCACAGTTTCAAACAACAACCCCATTGGCCGTCTTGACCATTGGAAACTCAGCTGGGAATGGATCAATGATGAGTTCATATACACAATGAAAGGTGCATATCCATCAAACGTTGATTCTTCTGAATGTATCTTTGGTTCACAAGGTGAGTACTACAAGAAACTTGACTTTGCCGATGTGTTGAACTGCGAAAGAAGGCCAACCGTAGTTGATCTCCCTCCAACAAGGTTCAATGATTCAAAACTTGGTAAAGTCCCATTTTGCTGCAGAAATGGTACATTGTTGCCACCCACAATGGATCCTAGTAAGTCAATTTCAAGGTTCCAAATGCAGGTCTTCAAGATGCCTCCAAACATCAATCGTTCCCACCTTGCGCCACCTAGGAACTGGAAGATAAGTGGTGAGGAACTCAACCCTGAATACCAATGTGGGAATCCTGTTAGGGTGAGTCCTAGTGAGTCTTTGGATCCAACAGGTTTGCCATCAAATACATCTGCAATTGCAAGTTGGCAAATTCTCTGCAACATAACAAGGAACACAAGAAAAAGCAAATGTTGTGTCTCATTTTCAGCTTTTTTCAATGAATCTGTTGTTCCCTGCCAAACATGTGCATGTGGATGCTCCGCGAAGTCAGAGAGGACGTGCAGTGTGGCTGAACCGGCTGTTCTGCTTCCCCCGGAGGCACTTCTTGTTCCATTTGAGAATAGAACAAAAATGGCTCATACTTGGGCTGACAGAAAGCATCTATCAGTGCCTAATCCTATGCCTTGTGGTGATAACTGTGGTGTGAGCATCAACTGGCATGTGAATACAGATTACCGGCGAGGTTGGACTGCAAGGATCACGCTTTTCAACTGGGGCGAAACTGATTTCGCAGACTGGTTTGTCGCAGTGGAAATGGATAAAGCAGCCCCTGGTTTTGAGAAAATGTACTCATTCAATGCTAGTTCATTAGACAAAGTGAAGAACACAATATTCATGCAAGGAAAGGAAGGATTGAACTTCCTTGTAGCCGAAGCAAATGGATCCAACCCAAAAAAAGATCCGAAGGTGCCCGGGAAACAACAATCCGTGATCTCATTTAGAAAGAAAAATACTCCTGGAATCGAAGTGGTAGATGGTGATGGATTTCCCAATAAAGTATTCTTCAATGGTGAGGAATGTTCTCTTCCTTTGGTATATCCAAGCAGTGGTTTCAGGAATGAGTTTTCTTTTGTTCCCATGTTGCTCCTGATGTTGTTGCCAATCATATGGATGTGGCAATAG 1950 0.4697 MAMALHDHVFFYIFVIISAAPLSLSQPQAASSCNGIFLSYTYTSGYRLPPNTSDTADQPYRFTSELTVLNNGLEDLKSWKVFVGFRHREWLVSASNAELADGTGLPAAVGNGTVLEGSEVRDLKTAAETAGDLKQMMVTVDMVGTVFGVAPPNVPMPSTIRLSNEGFICRKPTSQAGNNETHTCCTVDPNSKTNTPTDEQEFPLPQKGGDLSIIYDVTKTYESNYWAEVTVSNNNPIGRLDHWKLSWEWINDEFIYTMKGAYPSNVDSSECIFGSQGEYYKKLDFADVLNCERRPTVVDLPPTRFNDSKLGKVPFCCRNGTLLPPTMDPSKSISRFQMQVFKMPPNINRSHLAPPRNWKISGEELNPEYQCGNPVRVSPSESLDPTGLPSNTSAIASWQILCNITRNTRKSKCCVSFSAFFNESVVPCQTCACGCSAKSERTCSVAEPAVLLPPEALLVPFENRTKMAHTWADRKHLSVPNPMPCGDNCGVSINWHVNTDYRRGWTARITLFNWGETDFADWFVAVEMDKAAPGFEKMYSFNASSLDKVKNTIFMQGKEGLNFLVAEANGSNPKKDPKVPGKQQSVISFRKKNTPGIEVVDGDGFPNKVFFNGEECSLPLVYPSSGFRNEFSFVPMLLLMLLPIIWMWQ* 650
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g1371 649 Pfam COBRA-like protein 225 405 IPR006918 GO:0010215|GO:0031225
Amo14g1371 649 PANTHER COBRA-LIKE PROTEIN 7 1 645 - -
Amo14g1371 649 PANTHER COBRA-LIKE PROTEIN 7 1 645 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g1371 Amo-Chr14 22809576 22812791 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo14g1371 17 632 COBRA Gene Family AT4G16120 61.199 0.0 793
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g1371 - - mtr:MTR_2g034950 957.207
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo14g1371 14 22809576 22812791 Amo14g1371 14 22809576 22812791 ECH
Amo14g1371 14 22809576 22812791 Amo04g0242 04 3834632 3838009 hybridization