Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g1358 ATGATTTCTCTTGATTGTGTGCCAGCGGTCAACCTATTAATCATTTCTCTTGATTTGTTTTTCTCAATAGACCTGGATGTTGAAAATACCATGGAGGAAGCAAAGAGCAGATGGCTTCGTCCCAATGAGATTCATGCTATACTCTCAAATTCCAAATATTTCACTATCCATGTCAAGCCAGTGAATAAGCCCAAAAGTGGTCGTATTATATTATTTGACCGCAAAATGCTTAGGAACTTTCGAAAAGATGGGTACAACTGGAAGAAGAAAAATGATGGGAAAACAGTTAAAGAAGCACATGAGCACTTAAAAGTTGGTAACGAAGAAAGGATACACGTATATTATGCACATGGCCAAGATAACCCAGGACTTGTTCGTAGATGTTATTGGTTGCTTGATAAGAGGCTGGAGCACATAGTCCTTGTTCATTATCGTGAAACACAAGAGTCACAAGTTTCTCCTGTCACACCTGTAAATTCTCATTCTAGTTCAGCCTCTGACCAACCATGGTTATCAGAAGAATTAGACTCTGGGACCAACACTGCTTATGCCAGTGGATTTAATGACAGTTTGACGGTTGAGAGTCATGAAATGAAGCTTCATGAGCTTAATACACTTGAATGGGATGACCTCGTGCTTTCAAACGACAACACCTCTACTATAGCCACTAGTGGAAATGTTCAATCCTTTAATCAACAAGACCAAAGTTTTCTGAAAGGGAGCTCTGGCAATGTAGCGAGCAATTTGGTTCCAGAAATTCATTCTTTCAGTAAGTTAGCTCAGCCAATTGCTGAGAGCAATAGTGTTCCTTATAGTATTCCGGATAGTGTTGATTTTCAGAGGACTTCTCCTATCTCTTTAGCTGGTGTTGATTCCTCGAACACTTTGGTAAATCCAAGCTTGCAAAGTCAGGACAGCTTTGGAATGTGGATAAACAATATGATATCTGATTCGCCACCTTGTTCTGTTGAGTCAGCTCTTGAATCCTCAATTTCTTCGTCGGTTCAGGGGCAATATTCATCACTGGTGGCTGGTAATCAGCTATCTTCTCTGCCTGAACAAGTATTTACTATCACTGATGTGTCCCCGACATGGGCTTCTTCCACCGAGAAAACTAAGATCCTTGTAACTGGTTTATTTCATAATGACTATCAACACCTTGCAAAGTCCAATCTATATTGTGTCTGCAGTGATGCAAGTATTCCTGTAGAAACTGTTCAGCTTGGAGTCTATCGATGCTGGGTATCGCCGCATTCTCCTGGATTTGTGAATCTCTACTTGAGCTTTGATGGCCGTAAACCAATTAGTCAAGTTGTTAACTTTGAGTATCGGACACCACTATTGCACGATCCTACTGCTTTTATGGAACAGAAATATGACTGGGAAGAATTTCGACTTCAAATTAGGCTTACTAATTTGCTCTTTGATACAAAAAAGAGCCTTGATATTTTCTCTAGTAAAGTGTCACCCAAGTCGCTGAAAGAGGCTAGGAAATTTGCCTTTAAAACATCTTTTATTTCTAAAAGCTGGCAATATCTGATGAAATCAACCGAGGAAAATACAATTCCGTTTCCACAAGCAAAAGATGACTTGTTTCAAATTGCTTTGAAAAACAGATTAAAGGAATGGCTTTTGGAACGAATCAGCTTAGGTGTTAAGACTACTGAACATGATAAACAAGGGCAAGGAGTAATCCATTTGTGTGCAATTCTGGGATATACTTGGGCTGTTTCTTTATTTTCATGGTCCGGCTTGTCTCTTGATTTCCGTGACAAATTTGGATGGACAGCTCTACACTGGGCAGCATATTATGGAAGGGAGAAAATGGTTGGAACTCTTTTGTCTTTTGGGGCGAAGCCAAATTTGGTCACAGATCCAACTCCCCAAAATCCTGGTGGATGTACTGCTGCTGATCTTGCTTATATTAAGGGCTATGATGGGTTAGCGGCTTATCTTTCAGAAAAGTCTCTGGTCGAGCAAGTCAATGACATGAGCCTAGCCGGAAATATCAGTGGCCCACTGGAAACCACCACAGTGGATATAGGAAACACTGAGAACCTTACCGAGGACCAACTGTACCTCAAGGAGACACTGGCATCTTACCGCACTGCAGCTGAGGCAGCAGCACGGATACAATCTGCATTTAGGGAGCACTCTCTAAAATTGCGATCTATGGCAATTGAATCTTTAAGTCCAGAGGATCAACAACGCCAGATAGTGGCAGCAATGAAGATCCAGCATGCTTTCCGCAACTATGAGACAAGGAAAATGATGGCAGCTGCTGCTCGAATCCAACATAGATACCGTACATTTAAGTTGAGAAGAGAATTTCTCCACATGAAACGCCAGGTTATTAAAATTCAGGCTGCTTTCAGGGGATTTCAAGCCAGGAAGCAATATCGCAAAATTATTTGGTCTGTTGGAGTGCTTGAGAAAGTAATCCTGCGTTGGCGTTTGAAGAGAAAAGGTTTCCGTGGTCTCCAGGTCAATCCTGACCAAGAAATGAAAGATGAGACACAGGGAAGCGACATAGAGGAGGACTTCTTTAGGACTAGTAGGAAACAAGCTGAAGAACGTGTTGAGAGGTCTGTCGTGCGTGTACAAGCCATGTTCCGTTCTAAGAAGGCACAAGAAGAGTACAGAAGGATGAAGCTGGCACATAATCAAGCACAGCTGGAGCTTGAATTTGAAGAACTACTGATTTGTGGAGATGACATGATAACGGAGAAGCAGTAA 2736 0.4159 MISLDCVPAVNLLIISLDLFFSIDLDVENTMEEAKSRWLRPNEIHAILSNSKYFTIHVKPVNKPKSGRIILFDRKMLRNFRKDGYNWKKKNDGKTVKEAHEHLKVGNEERIHVYYAHGQDNPGLVRRCYWLLDKRLEHIVLVHYRETQESQVSPVTPVNSHSSSASDQPWLSEELDSGTNTAYASGFNDSLTVESHEMKLHELNTLEWDDLVLSNDNTSTIATSGNVQSFNQQDQSFLKGSSGNVASNLVPEIHSFSKLAQPIAESNSVPYSIPDSVDFQRTSPISLAGVDSSNTLVNPSLQSQDSFGMWINNMISDSPPCSVESALESSISSSVQGQYSSLVAGNQLSSLPEQVFTITDVSPTWASSTEKTKILVTGLFHNDYQHLAKSNLYCVCSDASIPVETVQLGVYRCWVSPHSPGFVNLYLSFDGRKPISQVVNFEYRTPLLHDPTAFMEQKYDWEEFRLQIRLTNLLFDTKKSLDIFSSKVSPKSLKEARKFAFKTSFISKSWQYLMKSTEENTIPFPQAKDDLFQIALKNRLKEWLLERISLGVKTTEHDKQGQGVIHLCAILGYTWAVSLFSWSGLSLDFRDKFGWTALHWAAYYGREKMVGTLLSFGAKPNLVTDPTPQNPGGCTAADLAYIKGYDGLAAYLSEKSLVEQVNDMSLAGNISGPLETTTVDIGNTENLTEDQLYLKETLASYRTAAEAAARIQSAFREHSLKLRSMAIESLSPEDQQRQIVAAMKIQHAFRNYETRKMMAAAARIQHRYRTFKLRREFLHMKRQVIKIQAAFRGFQARKQYRKIIWSVGVLEKVILRWRLKRKGFRGLQVNPDQEMKDETQGSDIEEDFFRTSRKQAEERVERSVVRVQAMFRSKKAQEEYRRMKLAHNQAQLELEFEELLICGDDMITEKQ* 912
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g1358 911 Gene3D - 756 804 - -
Amo14g1358 911 Pfam CG-1 domain 33 146 IPR005559 GO:0003677
Amo14g1358 911 ProSiteProfiles IQ motif profile. 738 767 IPR000048 GO:0005515
Amo14g1358 911 ProSiteProfiles Ankyrin repeat region circular profile. 593 621 - -
Amo14g1358 911 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 706 807 IPR027417 -
Amo14g1358 911 Gene3D - 524 663 IPR036770 -
Amo14g1358 911 SMART CG_1_2 31 148 IPR005559 GO:0003677
Amo14g1358 911 SUPERFAMILY Ankyrin repeat 531 655 IPR036770 -
Amo14g1358 911 SUPERFAMILY E set domains 357 444 IPR014756 -
Amo14g1358 911 ProSiteProfiles Ankyrin repeat profile. 593 625 IPR002110 GO:0005515
Amo14g1358 911 Gene3D Immunoglobulins 352 446 IPR013783 -
Amo14g1358 911 MobiDBLite consensus disorder prediction 150 173 - -
Amo14g1358 911 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR 16 906 - -
Amo14g1358 911 ProSiteProfiles IQ motif profile. 780 804 IPR000048 GO:0005515
Amo14g1358 911 ProSiteProfiles IQ motif profile. 861 889 IPR000048 GO:0005515
Amo14g1358 911 Pfam IQ calmodulin-binding motif 784 801 IPR000048 GO:0005515
Amo14g1358 911 ProSiteProfiles CG-1 DNA-binding domain profile. 27 153 IPR005559 GO:0003677
Amo14g1358 911 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 16 906 - -
Amo14g1358 911 SMART iq_5 737 759 IPR000048 GO:0005515
Amo14g1358 911 SMART iq_5 779 801 IPR000048 GO:0005515
Amo14g1358 911 SMART iq_5 859 881 IPR000048 GO:0005515
Amo14g1358 911 ProSiteProfiles IQ motif profile. 757 786 IPR000048 GO:0005515
Amo14g1358 911 Pfam Ankyrin repeats (3 copies) 538 622 IPR002110 GO:0005515
Amo14g1358 911 Coils Coil 873 893 - -
Amo14g1358 911 SMART ANK_2a 593 622 IPR002110 GO:0005515
Amo14g1358 911 SMART ANK_2a 632 663 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g1358 Amo-Chr14 22468058 22473943 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo14g1358 31 893 CAMTA Transcription Factor Family AT3G16940 55.390 0.0 925
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CAMTA Amo14g1358 Ank_2 1.2e-06 CL0465
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g1358 K21596 - gmx:100819198 1306.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo14g1358 14 22468058 22473943 Amo14g1358 14 22468058 22473943 ECH
Amo01g3316 01 105470857 105477911 Amo14g1358 14 22468058 22473943 PCT
Amo14g1358 14 22468058 22473943 Amo01g3316 01 105470857 105477911 PCT