Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g1328 ATGGAAAATTTGAGTCCTTTCAATGAGTTCGGTTTTAGTGCAATTGAGGATAAACATAGTTCATCAAATTATACTTCTTGGGCTATAGAGGGAATGAATGAAGTGAACAAGGTTCAATTTTCTGGTGCTGAAGAGTGGGGTGAGTCAATGGGAATTGACCCTTTTGGGTCTAGTTTTGAATTCTTTCCTTCACAGCAGCAGCAGCAACAACAATTATCATATCTTGAGTATGGAACATTGGAGAGTCTACAATTTGTTGCAGTTTCTCCACCACCACAAACCCATACATACTTTGATGACCTCCACATGTTTGATGAAAATCCAACAAGAATGGTTCCACTAAGTGAAGAAACTATTGCAAACGACAAACAGCAAAACTCATCAACTCCTTTAGCATCACTTGAGTTATTGAAGAGCTATGGCAGCAACAAAGGATTTAAGAAGTTATGTGATGAAGAGAAAATCATGCAACCAATTGATCACTCTGCTGCAGGTAATGAAGTTCTTGGAAGAAAGCTTTCAACTGACGATGTGATGAGGATAGCAGGAACAAGGTTCATTCAATCATCACCATCATCACCAAAATCTTTAGGATCATCAGCTTTGAAGTCAATTTTTAGCCACCCTTTTGGTCAATTTTTCTCAGGACTCTCTGATGAGGAGAAAGAGGAGGTTCAACTTGCTGAATCACTCTTGGCTTGTGCTGAGAAAGTGGGGTTTAAGCAGTTCGGGCGAGCCGGCAAGTTGCTATCTCAATGCGAGTCATCGTCTTCCAAGACCGGTTCACCAGTTAAGCGAGTTGTTCATTACTTCGCGGAGGCTCTTCGCCTCAGGATTGATCTTGAGACGGGAAGAATTTCATCCAAGGACTTGAAAAAGATGCAACCAATGGATCCTCGAGAGATAACCAAGAATCTCACCCCCTCTGTTTTGGCATTTTATGAAGCAGCTCCTTTCTGTCAGATCACAATGTTCACACTAGTCCAATCTATAATTGAAAATGTTACTGAGGCAAAGAAGATTCACGTCATTGATTTTGAAATCAGAAAGGGTGTGCAATGGACAACCCTGATGCAATCCCTTGTGTCAAGAAATCGATGTCCTTTAGAGCTGCTTAAGATAACAGCTGTTGGAAGTGGAAGCAATTCGAAGCTTATCATAGAGGACACTGGAAAGAGGTTGAAGGATTTTGCAATAAGCTTGAAGATAAACCTTTGCTATGATTATGTTATTGTACCTGACATGCTGCAACTCAGAGAGGATCTATTTAAGATAGATCCTGAGGAAACAATTGTGGTTTACTCTCAGTATGCACTTGGCAGCAAGATTCAGCAGCCGGACCAGCTCGAAACTATCATGAGAGTTGTCAAAACAATAAGGCCTACTGTACTTGCCATAACTGAAATTGAGGCGAGCCACAATTCGACTTCATTTGTAAACCGGTTCATTGAGGCGCTTTTCTACTTCAGTGCATTGTTTGATTGTTTAGAGAATTGTATGAAGCATGACGAGCCGAACAGGCTGGTTTTCGAGTCGCAGTACCTTGATTATGGAATCAAGAACATATTGGCTGCCGAGGGAGCAGAGAGGAATGCTAGGAATGTGAGGATTGATGTATGGAGGGCATTTTTCTCCCGGTTTGGACTGGTGGAAGCAGAGATTAGCATGTTATCTTTGTTCCAAGCTGAGCTTGTTGCTAAAAGGTTCCCTTGTGGAAGCAGTTGTACATTTGATTGGGATGGGAATTCCCTTCTTTTGGGGTGGAAGGGAACACCATTGAACTCTATTTCCGTGTGGAAGTTCCTATGA 1809 0.4174 MENLSPFNEFGFSAIEDKHSSSNYTSWAIEGMNEVNKVQFSGAEEWGESMGIDPFGSSFEFFPSQQQQQQQLSYLEYGTLESLQFVAVSPPPQTHTYFDDLHMFDENPTRMVPLSEETIANDKQQNSSTPLASLELLKSYGSNKGFKKLCDEEKIMQPIDHSAAGNEVLGRKLSTDDVMRIAGTRFIQSSPSSPKSLGSSALKSIFSHPFGQFFSGLSDEEKEEVQLAESLLACAEKVGFKQFGRAGKLLSQCESSSSKTGSPVKRVVHYFAEALRLRIDLETGRISSKDLKKMQPMDPREITKNLTPSVLAFYEAAPFCQITMFTLVQSIIENVTEAKKIHVIDFEIRKGVQWTTLMQSLVSRNRCPLELLKITAVGSGSNSKLIIEDTGKRLKDFAISLKINLCYDYVIVPDMLQLREDLFKIDPEETIVVYSQYALGSKIQQPDQLETIMRVVKTIRPTVLAITEIEASHNSTSFVNRFIEALFYFSALFDCLENCMKHDEPNRLVFESQYLDYGIKNILAAEGAERNARNVRIDVWRAFFSRFGLVEAEISMLSLFQAELVAKRFPCGSSCTFDWDGNSLLLGWKGTPLNSISVWKFL* 603
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g1328 602 ProSiteProfiles GRAS family profile. 218 600 IPR005202 -
Amo14g1328 602 Pfam GRAS domain family 228 600 IPR005202 -
Amo14g1328 602 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 56 600 IPR005202 -
Amo14g1328 602 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 56 600 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g1328 Amo-Chr14 21598291 21600212 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo14g1328 221 601 GRAS Transcription Factor Family AT5G17490 30.990 9.84e-51 181
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Amo14g1328 GRAS 3.5e-85 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g1328 - - adu:107483434 1139.79
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo14g1328 14 21598291 21600212 Amo04g0031 04 475708 477890 hybridization