Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g1308 ATGTATGGAGCGTTTGCCTCCACCACCTATAAACTAGAGGCTTCTAGTTGCGGGATGAATCCAAAAATTTTAAGTCGTAGATACAAATATGTAGCACATAAAAATAACAAAAAAATATATAAACATATTAAAGGAAGAATACACCACCACTTTCATCACTATCATCACCGCCACAAATCTTTTCACCGCCATCACCACCATTTTCATTGTCTATACCCACCACTACTATCGATGATCTCAACTTTCTCGACGATGATACTAAAAGAGGGAGACTTTGGTCCTTTATATGAGTGGTTAGGTATCACCGATGAAGATGCTCCACCGGTTGAAAGACCAGTAAAGCGTTCTCTTCCTCCAGACGCAATTGTTCCAGAATCTTTTGAAACAGTTGCACAATCAGAAAGCTCATCCTTTTTTTCAATTCCATCCAATCCTGATGTCGCTGTTAGTAACAACAATAATAGCTCTAGAGTTGCTGGTAAACGTCCAGCAGAATCTGTTGCCGGTGACGGTGGAAATGCAAGTCCGAGAAGCGATGAACCTGATGATGAAAAAGTTAATACTATAACTAGGCTGAAACTGAAACCATCTACAATGACATCGATTGCAGCAACCATGAGGCTAAATAGAAGGAGTGAAAATAATATTCCAAAATTGGCTTTCTTGACGGAGAGTGAATCAGACAACCTTGAAGATGGCTATAAATGGCGCAAGTACGGTCGAAAAACCGTGAGAAACAGCCCTTACCCAAGGAACTACTATCGTTGCACAGCAATTGGTTGCAATGTGAAGAAGAGAGTGGAGCGGTGGTTAGATGATCCCACCCATGTATTAACCACCTATGAGGGTCTACACCTTCATGGTTTGCCACCGATCCCCCCTACTCCTTCCAAGTCCTTCCACCTCTACAACAACTGCACCACTGGCCCCAAACCTGACAGATGCAGCTGTAGCTGTCGATGTAAAGGTGCAGTCGCAGTTGCAGGTGCAGGGGAACAAAATCGTGCTAATAACGCTATTACTAGTGTTCATCTTGGAACTGTCAGTGGTGGTAGCGGTGTTAATGACGGTGGCTCGCTGCGCATCGTGGCAGGTGAAAATGAATTTAATTATAATAAACACATGCAGAATGTAGAACAAGCAATTACACCAATAATATTACAGAACTTCATGTTAAGTGCTCCACAGACTTCCTTGAATAATTTTACTCCCATGACTATTATTAATAATGGTCATTACCAATCATCACTGATGAATGTTCATCATGATGGTAACAATCATCGTCAAGATTGTTTTGGTGCTGGATCTTCAAATGGTGGTGCCGAGGATTCGTTTAGGAAGAAGAGCACTGGTACCGGGCTGCTTGAAGATATTGTTAATTTCTCATGA 1389 0.4183 MYGAFASTTYKLEASSCGMNPKILSRRYKYVAHKNNKKIYKHIKGRIHHHFHHYHHRHKSFHRHHHHFHCLYPPLLSMISTFSTMILKEGDFGPLYEWLGITDEDAPPVERPVKRSLPPDAIVPESFETVAQSESSSFFSIPSNPDVAVSNNNNSSRVAGKRPAESVAGDGGNASPRSDEPDDEKVNTITRLKLKPSTMTSIAATMRLNRRSENNIPKLAFLTESESDNLEDGYKWRKYGRKTVRNSPYPRNYYRCTAIGCNVKKRVERWLDDPTHVLTTYEGLHLHGLPPIPPTPSKSFHLYNNCTTGPKPDRCSCSCRCKGAVAVAGAGEQNRANNAITSVHLGTVSGGSGVNDGGSLRIVAGENEFNYNKHMQNVEQAITPIILQNFMLSAPQTSLNNFTPMTIINNGHYQSSLMNVHHDGNNHRQDCFGAGSSNGGAEDSFRKKSTGTGLLEDIVNFS* 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g1308 462 Pfam WRKY DNA -binding domain 231 287 IPR003657 GO:0003700|GO:0006355|GO:0043565
Amo14g1308 462 Gene3D WRKY domain 215 291 IPR036576 GO:0003700|GO:0006355|GO:0043565
Amo14g1308 462 SMART WRKY_cls 230 289 IPR003657 GO:0003700|GO:0006355|GO:0043565
Amo14g1308 462 MobiDBLite consensus disorder prediction 137 160 - -
Amo14g1308 462 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 124 299 IPR044810 GO:0003700
Amo14g1308 462 MobiDBLite consensus disorder prediction 137 186 - -
Amo14g1308 462 PANTHER WRKY TRANSCRIPTION FACTOR 48-RELATED 124 299 - -
Amo14g1308 462 SUPERFAMILY WRKY DNA-binding domain 223 290 IPR036576 GO:0003700|GO:0006355|GO:0043565
Amo14g1308 462 ProSiteProfiles WRKY domain profile. 225 290 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g1308 Amo-Chr14 21323572 21327800 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo14g1308 218 293 WRKY Transcription Factor Family AT5G49520 67.105 4.06e-31 122
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Amo14g1308 WRKY 2.5e-21 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g1308 - - adu:107483375 612.838