Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g1293 ATGGGAACTTCAGAAGCAAAAGAAGAAGAGCTTGTGAAGAAGATAGAGAAGCTTGAAGCTGGCCATGTTCAGCTGAAGCATGAGATGTCGAAGCTGAAGCTATCTGAACGCCGCCATCATRACCGCCACAGGTCGCACTCCTTGTCGCCGCAGCGTTCYAGGCTTGGCGGTTGTGGCGGTGGCGGGYMTGCTGCTGCTGGTTGTAACAACAAAGGGTCTTCTTCTTCACCCTTGAAGAGGGAGAGTCGCAGCAGCAATAATCATAATCATAATCACAATCAGAACCAGAATCAGAATGAAGATGGTGATGGTGATTGTGATGGTGATGGTGATGTTGTTGGTGTGAATGTTGGCCTTAGTGAGAAGCAGTATATGAACATTTTGCAGTCAATGGGGCACTCGCTTCATATTCTGGATCTTCAATGCCGGATTATATATTGGAATCCTAGTGCCGAAAATCTGTATGGTTATGCAGCAGTAGAGGCTCTTGGAAAAGATGGGATTGAGCTGCTCGTAGACCCTATTGATTTCGGACTAGCATATGATGTATTCAACCATGTCACTGTGGGGGAGAGTTGGAGCGGCCAGTTCCCTGTCAAGAACAAGATGGGGGAGAAATTTTCAGTTGTGGCAACCAACACGCCATTCTATGATGACGATAGGAAGTTGATTGGGGTTATCAGTGTGTCCATTGATTCTAGACCCTTTCTTGAAACTCGAGCTACTTTATCGGATGTGAAGAATGCTGCACCAGGTTCAGACTTGGATTATAACCGCGCGAAGAGTGGCATTTCAAATAAACTTGGCCTTGACTCTCAGCAGCCACTTCAAGTTGCTCTAGCATCCAAAATTTCTAATTTGGCATCAAAGGTGAGTAATAAAGTTAAGTCAAGAATGCGGACAGGAGAAAACGGTGTTGACCGTGATGGTTGGAGCGGAGAAAGTCATCATTCTGATCAGAGTTTTTCGGATTGTGTTTTTTCTGACCAGAAAGAGGATGGTAATTCCAGTGGAGCTAGCACTCCCAGAGGTGATGTACCACCTCCATTTGGTGTATTTTGTCATGTTGAAGAGAAATCACCAGCTAAATCTTCGAGAGACTCTGGTGATGATGGCGAAGGAAAACCAATTCACAAGATCATAACTTCTAAAGCTGAAGCGTGGATTCAAAAGAGAACATTGTCATGGCCATGGAGAGGAAATGGTCAAGCTGGATCCGAGGCAAGAAATGTTTCTGTTGCTAGGCCACTGGTGCAGAATGATCAAGAAAATGAACTGGTTAATCAGATGAATCTTTCTTCCGAGTCCAGGATGGAAGTCCAGGCAGGTAATCGGCCTGTTAACAACGAGGCTTCAGGATCGTGGTCCTCAGTTAACGTTAACAGTACTAGCAGTACCAGCAGCTGCGGCAGTGGCAGCAGTGGTGCTGTCAATAATAAAGTGGATATTGATACCGATTGCTTGGATTATGAAATCTTGTGGGAGGACCTCACAATTGGAGAACAAATTGGGCAAGGTTCTTGTGGAACTGTATATCATGCCCTGTGGTATGGATCAGATGTTGCGGTCAAAGTATTCTCAAAGCAAGAATATTCAGAGGATGTGATACTATCCTTCAGACAAGAGGTATCTGTCTTGAAAAGACTTCGCCATCCAAATATTATTCTCTTCATGGGGGCAGTGACTTCACCTCAACGTCTCTGCATTGTGACAGAGTTTCTCCCACGTGGAAGCTTGTTTCGTTTGCTCCAAAGAAATACATCCAAACTTGACTGGAGACGGCGAGTTCATATGGCTTTAGATATCGCACGTGGTGTGAATTATCTTCATCGTTGCAGCCCCCCTATTGTTCATCGAGATTTGAAGTCTTCAAATCTCCTAGTTGACAAGAATTGGACTGTGAAGGTTGGTGATTTTGGTCTTTCACGCCTTAAGCATGAAACATATCTCACAACCAAAACAGGAAAGGGCACGCCTCAATGGATGGCACCAGAAGTTCTTCGAAATGAACCCTCGGATGAGAAGTCCGATGTGTACAGCTTTGGGGTGATATTGTGGGAACTTGCAACTGAAAAGATCCCGTGGGATACTCTCAATGCAATGCAGGTTATTGGCGCTGTAGGGTTTATGAACCATCAGTTAGAAATTCCGGCAGATGTTGATCCGCAGTGGGCTTCTATAATGGAGAGCTGCTGGCATAGATCCAACCGGAGGCACGGCCATCCCTGGACTCCACCGCTGGGTTCCACCAGATCCATCCCCTTTTCCACGCCACACTCCCTCACTTCCTTCAGAAGCCGCAAGCTCTTCCCTTCCTCCTCTGCTTCCTCCTTATCCTCAGTTCCTCACATGGATCTCCTTTACCATCCACCATTCCTCTTCTTCCTCCTCCGCCCGCCTCCAATGCTTTCCGTCACCGCTAACAGAATCAACTCGCGACGCAGATAG 2448 0.4624 MGTSEAKEEELVKKIEKLEAGHVQLKHEMSKLKLSERRHHXRHRSHSLSPQRSRLGGCGGGGXAAAGCNNKGSSSSPLKRESRSSNNHNHNHNQNQNQNEDGDGDCDGDGDVVGVNVGLSEKQYMNILQSMGHSLHILDLQCRIIYWNPSAENLYGYAAVEALGKDGIELLVDPIDFGLAYDVFNHVTVGESWSGQFPVKNKMGEKFSVVATNTPFYDDDRKLIGVISVSIDSRPFLETRATLSDVKNAAPGSDLDYNRAKSGISNKLGLDSQQPLQVALASKISNLASKVSNKVKSRMRTGENGVDRDGWSGESHHSDQSFSDCVFSDQKEDGNSSGASTPRGDVPPPFGVFCHVEEKSPAKSSRDSGDDGEGKPIHKIITSKAEAWIQKRTLSWPWRGNGQAGSEARNVSVARPLVQNDQENELVNQMNLSSESRMEVQAGNRPVNNEASGSWSSVNVNSTSSTSSCGSGSSGAVNNKVDIDTDCLDYEILWEDLTIGEQIGQGSCGTVYHALWYGSDVAVKVFSKQEYSEDVILSFRQEVSVLKRLRHPNIILFMGAVTSPQRLCIVTEFLPRGSLFRLLQRNTSKLDWRRRVHMALDIARGVNYLHRCSPPIVHRDLKSSNLLVDKNWTVKVGDFGLSRLKHETYLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDTLNAMQVIGAVGFMNHQLEIPADVDPQWASIMESCWHRSNRRHGHPWTPPLGSTRSIPFSTPHSLTSFRSRKLFPSSSASSLSSVPHMDLLYHPPFLFFLLRPPPMLSVTANRINSRRR* 816
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g1293 815 CDD PAS 137 232 IPR000014 -
Amo14g1293 815 Pfam PAS domain 137 232 IPR000014 -
Amo14g1293 815 Coils Coil 8 35 - -
Amo14g1293 815 CDD STKc_MAP3K-like 503 734 - -
Amo14g1293 815 Gene3D PAS domain 133 234 - -
Amo14g1293 815 SUPERFAMILY PYP-like sensor domain (PAS domain) 120 232 IPR035965 -
Amo14g1293 815 SMART serkin_6 497 744 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo14g1293 815 MobiDBLite consensus disorder prediction 295 377 - -
Amo14g1293 815 ProSiteProfiles Protein kinase domain profile. 497 793 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo14g1293 815 Gene3D Transferase(Phosphotransferase) domain 1 576 739 - -
Amo14g1293 815 MobiDBLite consensus disorder prediction 296 315 - -
Amo14g1293 815 Gene3D Phosphorylase Kinase; domain 1 490 574 - -
Amo14g1293 815 SMART pas_2 122 189 IPR000014 -
Amo14g1293 815 MobiDBLite consensus disorder prediction 316 342 - -
Amo14g1293 815 TIGRFAM sensory_box: PAS domain S-box protein 120 232 IPR000014 -
Amo14g1293 815 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 30 734 - -
Amo14g1293 815 MobiDBLite consensus disorder prediction 26 112 - -
Amo14g1293 815 MobiDBLite consensus disorder prediction 68 101 - -
Amo14g1293 815 Pfam Protein tyrosine and serine/threonine kinase 497 736 IPR001245 GO:0004672|GO:0006468
Amo14g1293 815 SUPERFAMILY Protein kinase-like (PK-like) 486 735 IPR011009 -
Amo14g1293 815 MobiDBLite consensus disorder prediction 440 475 - -
Amo14g1293 815 ProSiteProfiles PAS repeat profile. 120 191 IPR000014 -
Amo14g1293 815 PANTHER SERINE/THREONINE-PROTEIN KINASE DDB_G0282963 ISOFORM X1-RELATED 30 734 - -
Amo14g1293 815 ProSitePatterns Serine/Threonine protein kinases active-site signature. 616 628 IPR008271 GO:0004672|GO:0006468
Amo14g1293 815 MobiDBLite consensus disorder prediction 359 377 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g1293 Amo-Chr14 20932237 20938765 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo14g1293 9 733 MAP Kinase Kinase Kinase AT3G06620 56.684 0.0 825
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Amo14g1293 PK_Tyr_Ser-Thr 1.2e-62 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g1293 - - gmx:100800867 989.178