Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g1287 ACTGAGAAGCAGATCTTTGATGCTATCTTGGAAGGGAAATTAGATCTAGAAAGCGCACCATGGCCTTCTATTTCAGCTGCTGCAAAAGATTTGATCAGGAAAATGTTAGCCTATGAACCTAAGAAACGCATCACAGCTTCTGCTACCCTTGAACACCCTTGGATGAAGGAAGTGGGGGAAACATCTGACAAGCCTATAGACAATGCGGTTTTAAGTAGGATGAAACAATTCAGAGCAATGAACAAGACGAAGAAACTTGCTTTAAAGGTGCCTTTACAATTCCATTCTAAATGTGAAAAATCACTTGATTATAGTATATTATTTCTTGTGTGTGATATGACAAATACTTTATCTTTTGACGTGGAAGGTGATAGCATAAAATCTTTCAGAGGAAGAAATCAGGGCCTAGAACAAATGTTCAACAATATGGATACGAATCGCATCGGCACAATCACTTTCGAAGAACTGAAATCTGGTTTGTCCAGATTGGGGCCATTGACTATTATGAATTCATTACTGCCATCATGCATCGGCATAAACTTGAGAAGGAAGAAGTATTTGATTTTGCAGACATTTAATGGGAAGAAGTGA 591 0.3824 TEKQIFDAILEGKLDLESAPWPSISAAAKDLIRKMLAYEPKKRITASATLEHPWMKEVGETSDKPIDNAVLSRMKQFRAMNKTKKLALKVPLQFHSKCEKSLDYSILFLVCDMTNTLSFDVEGDSIKSFRGRNQGLEQMFNNMDTNRIGTITFEELKSGLSRLGPLTIMNSLLPSCIGINLRRKKYLILQTFNGKK* 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g1287 196 Gene3D - 65 179 - -
Amo14g1287 196 Gene3D Transferase(Phosphotransferase) domain 1 2 56 - -
Amo14g1287 196 PANTHER CALCIUM-DEPENDENT PROTEIN KINASE 29 134 164 - -
Amo14g1287 196 SUPERFAMILY Protein kinase-like (PK-like) 2 79 IPR011009 -
Amo14g1287 196 PANTHER SERINE/THREONINE-PROTEIN KINASE 134 164 - -
Amo14g1287 196 ProSiteProfiles Protein kinase domain profile. 1 55 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo14g1287 196 ProSiteProfiles EF-hand calcium-binding domain profile. 131 166 IPR002048 GO:0005509
Amo14g1287 196 PANTHER SERINE/THREONINE-PROTEIN KINASE 1 93 - -
Amo14g1287 196 PANTHER CALCIUM-DEPENDENT PROTEIN KINASE 29 1 93 - -
Amo14g1287 196 SMART efh_1 135 163 IPR002048 GO:0005509
Amo14g1287 196 SUPERFAMILY EF-hand 133 166 IPR011992 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g1287 Amo-Chr14 20739877 20740550 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo14g1287 1 164 EF-hand Containing Proteins AT3G20410 53.049 6.99e-51 170
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Amo14g1287 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g1287 K13412 - aip:110266437 191.045