Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g1268 ATGGCGTTTTCACCCACTGAAGGAGTATCGATTAGTACATTGACCAATCCAACACGAGGTGATGAACAATTCAGTGTGGGTGAATTAGACATTCAAGAGCAAATAGCACGGAAGTTCGACGAAATTACCGATGTTGTTGTGACTAGAAAGGATGAGTTGGATGACAGACACCAGAAAGAACATGTGCTCTTTTTGGTATTGCCGGATCATAGTGGCGTAGGCGAAGAGGAAATTCCAGTTGTAGGAATGAGTTTCGGTTCGTTGCCTCTCGCACAGAAATTTTATGCAAACTATGCAAAGAAAGTTGTGTTCGTTACTAAAATCAGGAACACGAATTTCGACAAGACGCGAAAGGAGTCAAAGATACCGGTTAATCAATCTATTTACTGCACGCGAGAAGGTTATCAAGAGTCTAGGGTGAACGCAGCAACTCGAGCAAACAGAATTATAGCCACGAGATGCAGAGCAAGGATGTATGTCGTGCTGGACAATGAGAATGAATGTTGGGTTGTGTCTAGATTAGAACTGAGGCATTCTCACCCCTGTTCGGCTGAGAAAGCTGTCCACTATCATGAGTACCGGGAGCTGACCATGCATGCTAAGTGTGTCATTACGGATAACGACGAGACTGGAATAAGACCCAACAAGACAAATGTAGCTGAGTTTTCCACCTCTAACGACAACCTTTACGCGAATCGACGAAAGTGGGTTCCAATATTTTTCAAGAGTGAATTTTGGGCAGGCATGAGGAGTACACAACGTAGTGAAAGTATGCACGCATTTTATGGTGGATACCTGCATTGCAAGAGTGGGTTGGTTCAGTTCGTCCATGAATACGACAATGTCCTTGGAACCAAGGAACAAAAGGAGCTGGAAGATGATGCTGCGGACTCGAAAGGGGTCATCCCATGTATAGGGAGCACCGGCATTGAGAGACAGTTTCAGCAGGAATACACCAGTAGTATGTTCAGGATTCTTCAACTGGAGGGAGATACAATTTCTATTACAGTGGACGAGCAGAAGGTATTATGGGGGAAGCCGGTCTACCATACTTTCAGGGTCGACTTTGACCCTTTGAGTCGAAAGGGTCAGTACGAGTGCAACAAGTTTGAATCCGCTGGTATATTATGTTGCCACACCCTTGTGGTCTGGTCATACTACAGAGTTGACATAGTACCGAGCTGCTATGTTCTTCCTCGATGGAGTAAGAATGTCATCTGCAAGCACACTTACATCAAGAGTAGCCATGACGTGGCTCGGACTGCCCTTTGGGATGCAAAGTCCAAGCTGATTGATTACCGTGCCAGCATGTGTTCCACTACTGTTGCTGTGTCTCAGAATACCGTGCCCACACAGAGCACAAGCGGTGCGATTGTACATGACATACAGGGACCCTCAAGAGTCAAAACCAAAGGACGGCCTAAGGGTAAGAGACTTGGAGAAGAGTTGGACAAGTCAATTAAGAAATCAATGCAAAAAAGGAATAGGAAATCACACCCGGATGAGGTTWACCTTCCGTCARATAATGATCATCATGGGTCCCTTAATAAAAGATKTGAGGATTCTACTATGTGGAACTCATCGGAAGGTGGCGGATTCATGCACCTGTTGAATTCCTTTAGGCATATATAG 1632 0.4504 MAFSPTEGVSISTLTNPTRGDEQFSVGELDIQEQIARKFDEITDVVVTRKDELDDRHQKEHVLFLVLPDHSGVGEEEIPVVGMSFGSLPLAQKFYANYAKKVVFVTKIRNTNFDKTRKESKIPVNQSIYCTREGYQESRVNAATRANRIIATRCRARMYVVLDNENECWVVSRLELRHSHPCSAEKAVHYHEYRELTMHAKCVITDNDETGIRPNKTNVAEFSTSNDNLYANRRKWVPIFFKSEFWAGMRSTQRSESMHAFYGGYLHCKSGLVQFVHEYDNVLGTKEQKELEDDAADSKGVIPCIGSTGIERQFQQEYTSSMFRILQLEGDTISITVDEQKVLWGKPVYHTFRVDFDPLSRKGQYECNKFESAGILCCHTLVVWSYYRVDIVPSCYVLPRWSKNVICKHTYIKSSHDVARTALWDAKSKLIDYRASMCSTTVAVSQNTVPTQSTSGAIVHDIQGPSRVKTKGRPKGKRLGEELDKSIKKSMQKRNRKSHPDEVXLPSXNDHHGSLNKRXEDSTMWNSSEGGGFMHLLNSFRHI* 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g1268 543 PANTHER OS03G0843700 PROTEIN 228 436 - -
Amo14g1268 543 MobiDBLite consensus disorder prediction 462 531 - -
Amo14g1268 543 Pfam FAR1 DNA-binding domain 93 182 IPR004330 -
Amo14g1268 543 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 228 436 IPR031052 GO:0006355
Amo14g1268 543 PANTHER OS03G0843700 PROTEIN 60 195 - -
Amo14g1268 543 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 60 195 IPR031052 GO:0006355
Amo14g1268 543 MobiDBLite consensus disorder prediction 475 506 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g1268 Amo-Chr14 20447921 20451641 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo14g1268 FAR1 1e-10 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g1268 - - ahf:112730161 586.26