Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g1240 ATGGCTATGGAAGCTGCTGAGGCTTCAACCACACCACAGTTGGCGCTCGATGATACTGACATCAACTGGCACAGGCTGGACAAGACCAAGTTCCATGTAATTGGTGCCATTCTCTTCACTGCTCAATCAGCTTTGCTTCATCCAACAGCAGTGGTTAAGACAAGAATGCAAGTAGCTGGTTCTGGACTCTCTCAAATGCGTGGAATGTCGGTGTTCACTCATATTCTAAGGAGTGATGGTGTTCCCGGAATCTTTAGAGGTTTTGGCACTTCTGCTATTGGATCAATGCCTGGGAGGGTCCTAGCTTTGACGTCTCTAGAGATGTCGAAAGACATTATGATGAAATACACACAAGGTAGTGATATACCAGAAGCTTCAAGAATCGGCCTTGCGAATGGTGTGGCCGGCATGTTTTCCAATCTGGTGTCTTGTGTATACTTCGTGCCTTTGGATGTGATCTGCCAGAGGTTAATGGTACAAGGTCTTCCAGGAATGGCTCCTTGTCGAGGACCATTTGATGTTATACGTAAAGTTTTCGAGGCCGAGGGTTTCCGAGGCTTGTATAGAGGTTTTGGATTAACAGCCATAACTCAGTCACCGGCATCTGCACTTTGGTGGGGTTCATATGGTGCGGCGCAACACATAATTTGGAGGAGTTTGGGCTTCAAAGATGATGCAGAGAACAAACCTTCACATTTTCAAATGGTGACGGTTCAAGCTACAGCAGGGATGGTGGCCGGTGCGTGTTCTTCGGTTATCACTACTCCAATAGATACAGTAAAAACACGCCTTCAGGTATATGAAGCTTTAATCTTCTCTGGGTTTCCTGTTTCAAGGAAACTATTTTAA 849 0.4582 MAMEAAEASTTPQLALDDTDINWHRLDKTKFHVIGAILFTAQSALLHPTAVVKTRMQVAGSGLSQMRGMSVFTHILRSDGVPGIFRGFGTSAIGSMPGRVLALTSLEMSKDIMMKYTQGSDIPEASRIGLANGVAGMFSNLVSCVYFVPLDVICQRLMVQGLPGMAPCRGPFDVIRKVFEAEGFRGLYRGFGLTAITQSPASALWWGSYGAAQHIIWRSLGFKDDAENKPSHFQMVTVQATAGMVAGACSSVITTPIDTVKTRLQVYEALIFSGFPVSRKLF* 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g1240 282 ProSiteProfiles Solute carrier (Solcar) repeat profile. 127 215 IPR018108 -
Amo14g1240 282 ProSiteProfiles Solute carrier (Solcar) repeat profile. 234 282 IPR018108 -
Amo14g1240 282 Gene3D Mitochondrial carrier domain 24 275 IPR023395 -
Amo14g1240 282 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 1 269 - -
Amo14g1240 282 PANTHER OS01G0329400 PROTEIN 1 269 - -
Amo14g1240 282 SUPERFAMILY Mitochondrial carrier 25 269 IPR023395 -
Amo14g1240 282 Pfam Mitochondrial carrier protein 238 266 IPR018108 -
Amo14g1240 282 Pfam Mitochondrial carrier protein 131 217 IPR018108 -
Amo14g1240 282 Pfam Mitochondrial carrier protein 34 116 IPR018108 -
Amo14g1240 282 ProSiteProfiles Solute carrier (Solcar) repeat profile. 27 112 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g1240 Amo-Chr14 19852799 19855343 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo14g1240 18 266 Chloroplast and Mitochondria Gene Families AT5G15640 49.004 2.34e-81 246
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g1240 K15121 - oeu:111371547 453.366
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo14g1240 14 19852799 19855343 Amo04g0125 04 2125482 2142414 hybridization