Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g1210 ATGCTCCATCGGCGGTGCTATCAGCCTTGCATCGCCGTCACACCGAACTTCCATTGCACTGAACTTCTATCGCACCAAGGCTCTATCATACCTCTTCCCGTGTCTCAGCGATTGAAGACTAGTGTCCATGTTAACTTGGTCTTCCATATAGGACTGAGAATCAAGATGCTATATATGCCGCAATTGTTGGCAAAGGCTGGAATCAGGGAGGTCCATTTTTTCCCTTTCAATCATGGAGACAAGAGGACTGCTCTAACTTACATTGAATCTGATGGAAATTGGCATAGATCCAGCAAAGGTGCTCCTGAGCAGATATTGAACCTCTGCAACTGCAAAGAGGATGTGAGGAGAAAGGCTATGCAACTATTGTTAAGTTTGCTGACCGTGGGATCCGATCTTTGGGGGTTGCTAGACAGGTTTGACAAAAAAGGATATTAA 438 0.4543 MLHRRCYQPCIAVTPNFHCTELLSHQGSIIPLPVSQRLKTSVHVNLVFHIGLRIKMLYMPQLLAKAGIREVHFFPFNHGDKRTALTYIESDGNWHRSSKGAPEQILNLCNCKEDVRRKAMQLLLSLLTVGSDLWGLLDRFDKKGY* 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g1210 145 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 59 123 IPR023299 GO:0000166
Amo14g1210 145 PANTHER PLASMA MEMBRANE ATPASE 56 121 - -
Amo14g1210 145 Gene3D - 52 130 IPR023299 GO:0000166
Amo14g1210 145 PANTHER CALCIUM-TRANSPORTING ATPASE 56 121 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g1210 Amo-Chr14 19285983 19287031 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo14g1210 54 144 Primary Pumps ATPases AT2G24520 60.440 2.99e-31 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g1210 K01535 - aip:107636080 148.673