Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g1186 ATGTGCAGCAGTAGCGTCAGGGTACCAATGGAGAATAATAATAATAATAATTACAAGCATCAGGGTGATTTAACCGATATACTCCGTGGAGGACCATACGGCGGTGCTGCCACTGCTTCCGATGAACCGCCCTCTTCATATCACTGGCAACAGCAACTTGAAAACGACACCAACGCCTGCTACTTTGGGGATCCATTCTCAACCATGAGAGATCCTTTCCTTCACCAGCTCCACATCCCTCCTACTTCTTCCTCCTCTTACTTCGAAGAACCACCGCTACCACCGCCACCGCTGCCGCCGCCGCCGCCTACCTTGCCTACTCCATGTTATAACAGTTATGGTGGTGCACACCTTCAACATGACATGAGATCTTCCTCCTCCTCTTCTTCTTCCTCTTCTTCTTCAATTAGCTGCAACAACATATTCTCCAACATGATTCAGATCTCTCCCAGCACTAATAACACTTCTTCTTCTTGTTCCTCTTCGTCTTCTTCAAAATTAGCCATCTCTTCCTCTTCTTCTTCTCCTCCTTCTATGCTCTCAAATGTTAACGCCATGGTCAATGCAACATCAATCCCCTCCAACAAGCAAGATTGTCATCTTCTCGACAACGCTTCCGCACTTCAGATCTCATCTCCGCGCAATCCCGCTCTTAAGCGCAGGAAGAATCAGGCGAAAAAGGTGGTGTGTATTCCTGCACCAGCAGCTGCAAACAGCAGACAAACTGGAGAGGTTGTTCCTTCAGATTTGTGGGCTTGGAGGAAATACGGTCAGAAACCTATCAAAGGTTCACCTTATCCAAGGGGCTATTATAGATGCAGCAGCTCAAAGGGTTGTTCAGCAAGGAAACAAGTAGAGAGAAGCAGAACAGACCCAAACATGCTTGTTATTACTTACACTTCAGAGCACAATCATCCATGGCCTACTCAGAGAAACGCTCTTGCTGGTTCAACAAGGTCTCAGCCATCCAAGAACAACACCAATGCTAATATTGCTTCTTCAAAGAATTCAGAAACCTCAAAGGTTTCTGGTAATAATAACAAGCCAAAGGAGGAGAATAATAATCAGCAGCATGAGATAGGCAACAACAACAGTCAAGGAGGGAGTGGTTCAGTAGTGAAGGAAGAGATGGATCATCATCATAGCAATCATGATCTTGAGCTTGAGTTGGATAATGATGAAGAATTCAGTGATGGACTTTCATACAAGCCATCAATGATTGAAGAGGGTAGTAATAACAATAACCAATCTTCTGAGGATTTCTTTGCAGATTTGGGTGAAATTGAAGCTGATCCATTGAACCTGTTGTTCAGTAGTCATCAAGGTTTCAATGCAGGTGGTGGTGGTGGTGGTGGTGGTGATAATCAAAGGGAATCCAAGGCCTTAGATCCATTCAATCTCTTTGATAATTGGTCTTCAGGAGACACTAATAACAACTCCTCATCATTTGAAGAACCTAATAATAAGGGAAGGTTATAA 1479 0.4422 MCSSSVRVPMENNNNNNYKHQGDLTDILRGGPYGGAATASDEPPSSYHWQQQLENDTNACYFGDPFSTMRDPFLHQLHIPPTSSSSYFEEPPLPPPPLPPPPPTLPTPCYNSYGGAHLQHDMRSSSSSSSSSSSSISCNNIFSNMIQISPSTNNTSSSCSSSSSSKLAISSSSSSPPSMLSNVNAMVNATSIPSNKQDCHLLDNASALQISSPRNPALKRRKNQAKKVVCIPAPAAANSRQTGEVVPSDLWAWRKYGQKPIKGSPYPRGYYRCSSSKGCSARKQVERSRTDPNMLVITYTSEHNHPWPTQRNALAGSTRSQPSKNNTNANIASSKNSETSKVSGNNNKPKEENNNQQHEIGNNNSQGGSGSVVKEEMDHHHSNHDLELELDNDEEFSDGLSYKPSMIEEGSNNNNQSSEDFFADLGEIEADPLNLLFSSHQGFNAGGGGGGGGDNQRESKALDPFNLFDNWSSGDTNNNSSSFEEPNNKGRL* 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g1186 492 SUPERFAMILY WRKY DNA-binding domain 245 308 IPR036576 GO:0003700|GO:0006355|GO:0043565
Amo14g1186 492 Pfam WRKY DNA -binding domain 249 306 IPR003657 GO:0003700|GO:0006355|GO:0043565
Amo14g1186 492 MobiDBLite consensus disorder prediction 469 492 - -
Amo14g1186 492 MobiDBLite consensus disorder prediction 1 20 - -
Amo14g1186 492 MobiDBLite consensus disorder prediction 78 132 - -
Amo14g1186 492 PANTHER WRKY TRANSCRIPTION FACTOR 14-RELATED 21 470 - -
Amo14g1186 492 MobiDBLite consensus disorder prediction 87 108 - -
Amo14g1186 492 MobiDBLite consensus disorder prediction 299 419 - -
Amo14g1186 492 MobiDBLite consensus disorder prediction 444 492 - -
Amo14g1186 492 MobiDBLite consensus disorder prediction 153 178 - -
Amo14g1186 492 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 21 470 IPR044810 GO:0003700
Amo14g1186 492 SMART WRKY_cls 247 307 IPR003657 GO:0003700|GO:0006355|GO:0043565
Amo14g1186 492 Gene3D WRKY domain 221 301 IPR036576 GO:0003700|GO:0006355|GO:0043565
Amo14g1186 492 ProSiteProfiles WRKY domain profile. 242 308 IPR003657 GO:0003700|GO:0006355|GO:0043565
Amo14g1186 492 MobiDBLite consensus disorder prediction 118 132 - -
Amo14g1186 492 MobiDBLite consensus disorder prediction 273 292 - -
Amo14g1186 492 MobiDBLite consensus disorder prediction 373 388 - -
Amo14g1186 492 MobiDBLite consensus disorder prediction 299 371 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g1186 Amo-Chr14 18648573 18652804 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo14g1186 1 479 WRKY Transcription Factor Family AT1G30650 41.513 8.50e-87 271
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Amo14g1186 WRKY 2.8e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g1186 - - gmx:100805707 407.912
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo14g1186 14 18648573 18652804 Amo14g1186 14 18648573 18652804 ECH