Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g1155 ATGCTTGTTGATGGCCAAATTGTAGCAGTTAAAAAGTTCAAAGTTGAGGGAAATGTTGAAGAATTCATCAACGAATTCGTCATTCTTTCACAAATTAACCATAGAAATGTGGTTAAGTTGTTAGGGTGTTGTTTGGAGACAGAAATTCCTCTGCTTGTTTATGAATTCATTCCTAATGGTAATCTTTTCCAATATTTGCATGACCAAAATGAAGACTTACCAATGACATGGGAAATGCGTTTGAGAATTGCCACTGAAGTTGCAGAAGCTATATTTTACTTACACTCTGCTGCTTCTCAACCCATTTATCATAGAGATGTGAAATCAACAAATATTTTGTTGGATGGAAAGTACAGAGCAAAAGTAGCTGATTTTGGAGCATCTAAAATGATTTCTCTTGAAGATACTCACCTCACAACCGCAGTTCAAGGAACCTTTGGCTATTTAGATCCCGAATACTTTCATACAAGTCAATTAACAGAGAAAAGTGATGTGTATAGTTTCGGAGTAGTTCTTGTCGAGCTTCTAACCGGACAAAAACCAATATCATCATCGAGAACGGAAGAAGCCAAAAATTTGTCTCATTATTTTGTTTGTTCTATGGAGGAAAATCGTGTATTTGATATCATTGACGAAAGGGTGACAAAAGAGGGGGAAAAGGAGCATATAATTGCAGTTGCTAATCTTGCATATAGGTGCTTGGAGTTAAATGGGAAAAAAAGACCTAGTATGAAAGAAGTGGCAAGTGAACTATATAGGATCTTGAAATTGGAAATGAAGCCTAGCACACAACAAAACATTGAAGAAACAGAGTTTGCTGGAATTGAAGAATATCAATCTTGGGCTGCATCTTCTGTTTCTGATATAGGTTCAAATTCAACTCTAAGCAACACAATACCCACTTCAAAGTAA 912 0.3596 MLVDGQIVAVKKFKVEGNVEEFINEFVILSQINHRNVVKLLGCCLETEIPLLVYEFIPNGNLFQYLHDQNEDLPMTWEMRLRIATEVAEAIFYLHSAASQPIYHRDVKSTNILLDGKYRAKVADFGASKMISLEDTHLTTAVQGTFGYLDPEYFHTSQLTEKSDVYSFGVVLVELLTGQKPISSSRTEEAKNLSHYFVCSMEENRVFDIIDERVTKEGEKEHIIAVANLAYRCLELNGKKRPSMKEVASELYRILKLEMKPSTQQNIEETEFAGIEEYQSWAASSVSDIGSNSTLSNTIPTSK* 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g1155 303 Gene3D Transferase(Phosphotransferase) domain 1 57 278 - -
Amo14g1155 303 PANTHER - 1 271 - -
Amo14g1155 303 SMART serkin_6 1 252 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo14g1155 303 ProSiteProfiles Protein kinase domain profile. 1 255 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo14g1155 303 Gene3D Phosphorylase Kinase; domain 1 1 56 - -
Amo14g1155 303 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 1 271 IPR045274 GO:0007166
Amo14g1155 303 SUPERFAMILY Protein kinase-like (PK-like) 3 260 IPR011009 -
Amo14g1155 303 PIRSF ILK 2 269 - -
Amo14g1155 303 ProSitePatterns Serine/Threonine protein kinases active-site signature. 102 114 IPR008271 GO:0004672|GO:0006468
Amo14g1155 303 Pfam Protein tyrosine and serine/threonine kinase 7 251 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g1155 Amo-Chr14 18255631 18256542 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo14g1155 1 254 Receptor kinase-like Gene Family AT1G79670 65.625 1.16e-117 352
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Amo14g1155 PK_Tyr_Ser-Thr 2e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g1155 - - ahf:112796208 593.193