Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g1147 ATGCATGCCACAGGAGACACACGCTGCCTGCGAGGGTCTCGCTGCTGGTCCGGGTCTGGAGAACAGCGCACACGATCGAAAGGTGCTGGTTGGAGTCGCGATTGTTGTTTCAGGGGTCGCTGTGGTGCCGCGGCTGGTCCAAGACGTGAGAACAGCGCACACAATCAGAAGGTTTTGATAGATAATATAGATGCACACATATTTCCACAAGCCATGATTCTTCAATCTGCATTTCACTACTATTCTCATATCATTTTGATGATAATATCCATATATCCATTGTTGTTGGCATGTGCAAAAGATCTTACCATAGCAAAACCTGGTTGTGTTTCCACATGTGGGAACGTTGACATCGCTTACCCTTTTGGTATGAACGACTCCAATTGCTATGCTCACAAATTTTTCGAGATAGAGTGCAAAAATCACAAGCCTTACCTTGCAACATTCAATCTTGAGGTCACACAAATTTATGTAAACGTTAGCACAGTGGAGATCAAGAACCCAATCTACTATAGCTGCCAAAGCAAAAATGCTTTCATAAACCTAACAGGAAGCCCTTACGTGTATTCCCAAGAATACGACAAATTCATGGCCATTGGTTGCAACAAACTAGGGTTCTTGCGTTCCAACGGTTCAAAGGTTGGCGGTTGCGTGTCCATCTGCGACGGCGARGAAGCMGTTGGAAAGGTTGAATTCGGAAACGACGGTTGCCATGGGAGATACTGCTGTGAGACTTCACTGCCTATGCATGTTTGGGAGTACAACGCAACAATAAGGGATATTATTATTGGAGATGGAAGTGAGAGCAACACGTGTAGCTATGCCATGATTGTGAGTGATGCTTGGCTTCACAGTTATGGTTTGGGGATTCAGAAACTTAGTAACGTKGAGAACATGATTGATGTTCCTGCTGTTCTTGAGTGGGAGATTCGGTATGATATGGGGATCAATTCAACACTCTCTCCTTCTCGTGCTTGTTGTGACGSTTCGAGTCTTACGTCTCCAAGCAACACTTCCTCTGGTTTTAGGTGTCGCTGCTTGGATGGTTACGATGGCAATCCCTACATTCGAGGGGGTTGCAACGCTGTGGCATCCGGTAAAGAAAGTGGATCCAAATGGGCTATAATAGTTTCATCAAGTCTTGGGTCAGTCATTTTACTCCTTGGTGGATGGTTGTTGTACAAACTTATAAGGAAGAGAATAATAAAGAAACGCAAGGAAAAGTTCTTCAAGAAAAATGGCGGTTTGTTGTTAAAACAAAAGTTGTCTTCAGGCGAAGAAAATGTTGACAAAGTTGTTCTCTTCACCTTAAAAGAATTAGAAAATGCCACTGACAACTTCAATCTAAACAGAATTCTTGGAAAAGGAGGCCAAGGTACCGTTTACAAGGGAATGCTAGTAGATGGCAAAATCGTTGCAGTTAAAAAGTTCAAAGTCCAAGGAAACACTGCAGAATTCATCAATGAATTCGTTGTTCTTAATCAAATTAACCATAGAAATGTGGTTAAGTTATTAGGGTGTTGTTTGGAGGATGAAGTTCCTTTGCTCGTTTATGAATTTATTCCCAATGGTAACCTTTATGAACATCTTCATGAACAAAATGAAGATTTACCAATGACATGGGACATGAGATTGAGAATTGCCAGTGAGATTGCAGGAGCACTTTTTTACTTACACTCCATTGCTTCTCAACCCATTTATCATAGAGATATCAAATCAACAAACATACTATTGGATGAAAAATACAGGGCAAAAGTAGCAGATTTTGGAACCTCTAGAATAGTTTCTGCTGAAGCTACTCATCTCACTACGGTAGTTCAAGGAACTTTTGGTTATTTAGATCCTGAATACTTTCAAACTAGTCAGTTTACTGATAAGAGCGATGTTTATAGTTTTGGAGTAGTGCTTGTCGAACTTTTAACCGGACAGAAGGCAATATCGTCGATAAGATCGGACGAAGTGAGGGGTCTAGCTTCGTTTTTTGTTGTGTGTATGGAAGAGAATCAGGTATTTGACATTGTTGACAAAAGAGTGTTGAAGGAGGGAGAGAAAGAACATATAATTGCAGTGGCTAATCTTGCATATAGATGTTTAGAGTTGAATGGGAGAAAAAGGCCTACTATGAAACAAGTTACCTTGGAATTAGAAGGGATTAGAAGATTGGATTATTGGAAGGGTGGTTCGGCACAAGAAAACTTTGAAGAAATTGAGCTTGATAGAAATGAAGACAATCAACTATGGGATGGATATTCATATTCTAATGTGTCAGAAACATTGCACACTACTACAAGTAGCAGCAGGGAACTCTCCGAGGTTATGCCTATTCTTAAAATCAAATAA 2340 0.4073 MHATGDTRCLRGSRCWSGSGEQRTRSKGAGWSRDCCFRGRCGAAAGPRRENSAHNQKVLIDNIDAHIFPQAMILQSAFHYYSHIILMIISIYPLLLACAKDLTIAKPGCVSTCGNVDIAYPFGMNDSNCYAHKFFEIECKNHKPYLATFNLEVTQIYVNVSTVEIKNPIYYSCQSKNAFINLTGSPYVYSQEYDKFMAIGCNKLGFLRSNGSKVGGCVSICDGEEAVGKVEFGNDGCHGRYCCETSLPMHVWEYNATIRDIIIGDGSESNTCSYAMIVSDAWLHSYGLGIQKLSNVENMIDVPAVLEWEIRYDMGINSTLSPSRACCDXSSLTSPSNTSSGFRCRCLDGYDGNPYIRGGCNAVASGKESGSKWAIIVSSSLGSVILLLGGWLLYKLIRKRIIKKRKEKFFKKNGGLLLKQKLSSGEENVDKVVLFTLKELENATDNFNLNRILGKGGQGTVYKGMLVDGKIVAVKKFKVQGNTAEFINEFVVLNQINHRNVVKLLGCCLEDEVPLLVYEFIPNGNLYEHLHEQNEDLPMTWDMRLRIASEIAGALFYLHSIASQPIYHRDIKSTNILLDEKYRAKVADFGTSRIVSAEATHLTTVVQGTFGYLDPEYFQTSQFTDKSDVYSFGVVLVELLTGQKAISSIRSDEVRGLASFFVVCMEENQVFDIVDKRVLKEGEKEHIIAVANLAYRCLELNGRKRPTMKQVTLELEGIRRLDYWKGGSAQENFEEIELDRNEDNQLWDGYSYSNVSETLHTTTSSSRELSEVMPILKIK* 780
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g1147 779 PANTHER WALL ASSOCIATED KINASE-LIKE PROTEIN 90 773 - -
Amo14g1147 779 Pfam Protein kinase domain 448 711 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo14g1147 779 ProSitePatterns Serine/Threonine protein kinases active-site signature. 566 578 IPR008271 GO:0004672|GO:0006468
Amo14g1147 779 CDD STKc_IRAK 453 718 - -
Amo14g1147 779 Gene3D Transferase(Phosphotransferase) domain 1 521 739 - -
Amo14g1147 779 ProSiteProfiles Protein kinase domain profile. 447 718 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo14g1147 779 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 90 773 IPR045274 GO:0007166
Amo14g1147 779 SMART serkin_6 447 724 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo14g1147 779 SUPERFAMILY Protein kinase-like (PK-like) 428 715 IPR011009 -
Amo14g1147 779 Gene3D Phosphorylase Kinase; domain 1 419 520 - -
Amo14g1147 779 Pfam Wall-associated receptor kinase galacturonan-binding 109 166 IPR025287 GO:0030247
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g1147 Amo-Chr14 18120098 18127745 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo14g1147 101 774 Receptor kinase-like Gene Family AT1G79680 41.982 4.63e-177 525
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Amo14g1147 Pkinase 9.8e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g1147 - - mtr:MTR_2g031530 799.66