Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g1146 ATGATTCTTCAATCTGCATTTCACTACTATTCACATATCATCATTTTGATGATAATATCCATATATCCATTGTTATTGGCATGTGCAAAAGATCCCACCATAGCAAAACCTGGTTGTGTTTCCACATGTGGGAACGTTGACATCGCTTACCCTTTTGGTATGAACGACTCCAATTGCTATGCTCACCAATTTTTCGAGATAGAGTGCAAAAATCACAAGCCTTACCTTGCATCATTCAATCTTGAGGTCACACAAATTTATGTAAACATTAGTACGGTGGAGATCAAGAACCCAATCTACTATAGCTGCCAAAGCAAAAACGCTTTCATAAACCTAACAGGAAGCCCTTACGTGTATTCCCAAGAATACGACAAATTCATGGCCATTGGTTGCAACAAACTAGGGTTCTTGCGTTCCAACGGTTCAACGGTTGGCGGTTGCGTGTCCATCTGCGACGACGACGAAGCGGTTGGAAATGTTGAATTCGYGAACGACGGTTGCCATGGGAGATACTGCTGTGAGACTTCACTGCCTATGCATGTTTGGGAGTACAACGCAACAATAAGGGATATTGGAGATGGAAGTGAGAGCAACATGTGTAGCTATGCKATGATTGTGAGTGATGCTTGGCTTCAGAGTTATGGRTTGGGGATTCAGAAACTTAGTAACGTAGWYAACATGYTTGATGTTCCTGCTGTTCTTGAGTGGGAGYTTSGGTATGATATGGGGATCAATAATTCAARACTSTCTTCTTCTTCTCATGCTCGTTGTGACGCTTCGAGTCTTGCGTCTCCAACCAACACTACCTCTGGTTTTAGGTGTCGCTGCTTGGATGGTTACGATGGCAATCCCTACATTCAAGGGGGTTGCAACGCTGTGGCATCCGGTAAAGAAAACGGATCCAAGTGGGCTATAGTAGGAGTTTCATCAAGTCTTGGGTCAGTCATTTTACTCCTTGGTGGATGGTTGTTATACAAACTTATAAAGAAGAGAATAATAAAGAAACGCAAGGAAAAGTTCTTCAAGAAAAATGGAGGTTTGTTGTTAAAACAAAAGTTGTCTTCCGGCGAAGAAAATGTTGACAAAGTTGTTCTCTTCACCTTAAAAGAATTAGAAAATGCCACTGATAACTTCAATCTAAACAGAGTTCTTGGAAAAGGAGGCCAAGGTACCGTTTACAAGGGCATGCTAGTAGATGGCAAAATCGTTGCAGTGAAAAAGTTCAAAGTCCAAGGAAACACTGCAGAATTCATCAATGAATTCGTTGTTCTTAATCAAATTAACCATAGAAATGTGGTTAAGTTATTAGGGTGTTGTTTGGAGGATGAAGTTCCTTTGCTCGTTTATGAGTTTATTCCCAATGGTAACCTTTATGAACATCTTCATGAACAAAATGAGGATTTACCAATGACATGGGACATGAGATTGAGAATTGCSAGTGAGATTGCAGGAGCACTTTTTTACTTACACTCRATTGCTTCTCAACCCATTTATCACAGAGATATCAAATCAACAAARATACTWTTGGATGAAAAGTACAGGGCAAAAGTGGCAGATTTTGGAACCTCTAGAATAGTTTCTGCTGAAGCTACTCATCTCACTACGGTAGTTCAAGGAACTTTTGGTTATTTAGATCCTGAATACTTTCAAACTAGTCAGTTTACTGATAAGAGCGATGTTTATAGTTTTGGAGTAGTGCTTGTCGAACTTTTAACCGGACAGAAGGCAATATCGTCGATAAGATCGGACGAAGTGAGGGGTCTAGCTTCGTTTTTTGTTGTGTGTATGGAAGAGAATCAGGTATTTGACATTGTTGACAAAAGAGTGTTGAAGGAGGGAGAGAAAGAACATATAATTGCAGTGGCTAATCTTGCATATAGATGTTTAGAGTTGAATGGGAGAAAAAGGCCAAATATGAAAGAAGTTACCTTGGAATTAGAAGAGATTAGAAGATTGGATTATTGGAAGGGTGGTTCGGCACAAGAAAACTTTGAAGAAATTGAGCTTGATAGAAATGAAGACAGTCAACTATGGGATGGATATTCATATTCTAATGTGTCAGAAACATTGCACACTACTACAAGTAGCAGCAGGGAACTCTCCGAGATTATGCCTATTCTTACAATCAAATAA 2133 0.3938 MILQSAFHYYSHIIILMIISIYPLLLACAKDPTIAKPGCVSTCGNVDIAYPFGMNDSNCYAHQFFEIECKNHKPYLASFNLEVTQIYVNISTVEIKNPIYYSCQSKNAFINLTGSPYVYSQEYDKFMAIGCNKLGFLRSNGSTVGGCVSICDDDEAVGNVEFXNDGCHGRYCCETSLPMHVWEYNATIRDIGDGSESNMCSYAMIVSDAWLQSYGLGIQKLSNVXNMXDVPAVLEWEXXYDMGINNSXLSSSSHARCDASSLASPTNTTSGFRCRCLDGYDGNPYIQGGCNAVASGKENGSKWAIVGVSSSLGSVILLLGGWLLYKLIKKRIIKKRKEKFFKKNGGLLLKQKLSSGEENVDKVVLFTLKELENATDNFNLNRVLGKGGQGTVYKGMLVDGKIVAVKKFKVQGNTAEFINEFVVLNQINHRNVVKLLGCCLEDEVPLLVYEFIPNGNLYEHLHEQNEDLPMTWDMRLRIASEIAGALFYLHSIASQPIYHRDIKSTKILLDEKYRAKVADFGTSRIVSAEATHLTTVVQGTFGYLDPEYFQTSQFTDKSDVYSFGVVLVELLTGQKAISSIRSDEVRGLASFFVVCMEENQVFDIVDKRVLKEGEKEHIIAVANLAYRCLELNGRKRPNMKEVTLELEEIRRLDYWKGGSAQENFEEIELDRNEDSQLWDGYSYSNVSETLHTTTSSSRELSEIMPILTIK* 711
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g1146 710 Gene3D Phosphorylase Kinase; domain 1 350 451 - -
Amo14g1146 710 CDD STKc_IRAK 384 649 - -
Amo14g1146 710 Pfam Wall-associated receptor kinase galacturonan-binding 39 95 IPR025287 GO:0030247
Amo14g1146 710 Pfam Protein tyrosine and serine/threonine kinase 379 644 IPR001245 GO:0004672|GO:0006468
Amo14g1146 710 SUPERFAMILY Protein kinase-like (PK-like) 359 646 IPR011009 -
Amo14g1146 710 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 22 703 IPR045274 GO:0007166
Amo14g1146 710 Gene3D Transferase(Phosphotransferase) domain 1 452 669 - -
Amo14g1146 710 ProSiteProfiles Protein kinase domain profile. 378 649 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo14g1146 710 PANTHER WALL ASSOCIATED KINASE-LIKE PROTEIN 22 703 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g1146 Amo-Chr14 18083636 18087355 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo14g1146 31 705 Receptor kinase-like Gene Family AT1G79680 41.579 4.70e-179 528
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Amo14g1146 PK_Tyr_Ser-Thr 2.4e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g1146 - - gmx:100798794 808.905