Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g1116 ATGGTTTATTCCACCGTGAAGCACCTCAAAATGGATCACAGTGCGTCGCTTCAGTGCGCTGTGTGCTTGAGCGAGTTCAAGGACATAGACACGCTTAGACTTTTGCCCAAGTGCAGTCACGGCCAAGATGAAGTCGGAAAACATGGGTTCAAGGTTGAGATTCAGGAGTTAGAGGGAAGTGCCAACCATGTGTTCGATGAAATGTCTCGAAGAATGGGCTGA 222 0.4865 MVYSTVKHLKMDHSASLQCAVCLSEFKDIDTLRLLPKCSHGQDEVGKHGFKVEIQELEGSANHVFDEMSRRMG* 74
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g1116 73 Pfam RING-like zinc finger 18 40 IPR001841 -
Amo14g1116 73 SUPERFAMILY RING/U-box 8 40 - -
Amo14g1116 73 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 2 67 IPR013083 -
Amo14g1116 73 PANTHER RING-H2 FINGER PROTEIN ATL11 2 40 - -
Amo14g1116 73 PANTHER RING FINGER DOMAIN-CONTAINING 2 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g1116 Amo-Chr14 17405283 17405566 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo14g1116 2 40 Rapid Response to Elicitors AT3G05200 56.410 2.25e-09 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g1116 K10664 - zju:107425216 58.5362