Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g1113 ATGCCAATGTTTGAGTCGCTTGCTGACTCTCCGGCTACATGTTCCGGTCACAATTGCCGGTCACCGGAAAAAGACGGGGAGAGAGCTTGTGGAGCAAGTTCTGGCCTTGGCTCAAGGCTTGCTCGACCTAGTGATTGGTATCTCGAGTGGTTGTTAGCCATTGCGTTTGTTGGTGGAATAGCCGCACCTCTGAACTATCGCTGGGGTTTTGAAGAGGCGAAATTCGCAATGACTGTGGTGAAGCCAGTGATGTTAGTCACTGATGAGAGCAGCCAAACATGGTACTCAAAACTTCTGAAAACGGATGTTCCATCTCTGAGATGGCATGCTTTATTGGATTCCACTTCCTCAGATTTAGCAAAGCAGTGGAATGATATTGCTGTGTTGCACTCAGAAATGCTCAAGAAGCATCGTGTAAAGCCTCTACCATTTGATTATTCCTGGGCACCAGACGGTGCTGTAATGATATGCTTTACTTCAGGAACAACAGGAAAGCCTAAAGGAGTAACACTAAGCCATGGAGCATTGATCGTACAATCACTAGCAAAGATTGCCATAGTTGGATACAATGAGGATGATGTTTATCTGCATACTACTCCATTATGCCATATTGGGGGATTGTCATCGGCTTTGACCATGCTTATGGTTGGAGGTTGCCATGTCTTGATGCCGAAGTTCGATCCAAAATTAGCTGTTGATGCCATAGAGCGATACGGGGTGACATCTCTTATCACAGTCCCTGCAATAATGGCCGGTCTCATTTCTCTAATTAGGCACAAAGAGACATGGAAAGGGGGAGAAACCGTAAAGAAAATACTTAATGGGGGTGGAAGCCTCACACTTGAGCTCATCAAGGATACTAACTTATTCTTCCGTAAAGCTAAGCTTATCTCAGCTTATGGGATGACAGAGACATGTTCTTCAATGACATTCATGAACCTTTATGATCCAATGCATGAAACCACCATTAGCCAGAACCTTCAAATAGTTGGTGAGGCAGCATCATCAAATTCCATTCACCAGCCTCAAGGTATATGTGTTGGCAAAGCTGCACCTCATGTAGAACTTAAAATATGCGAAGATGATGGCACTAGTCACATAGGGAGAATTTTAACTAGAGGACCACACACAATGCTCAGGTATTGGGATCAAACTCTCACAAGTTCATCAAATGGCAGGAGTGAAGCATGGTTTGATACAGGTGACATTGGATCAATTGATAATCATGGTAATTTGTGGCTCCTTGGACGAACAAATGGTCGAATCAAGAGTGGTGGGGAGAACATTTACCCTGAAGAGGTTGAAGCAATTCTACAAGGACATCCAGGGATTACAAGTGTTGTTGTTGTAGGAATCCCAGATGCCTATCTTACAGAAATGGTAGCAGCATGTATCCAACTAACAGAAAATTGGCAATGGTTAGATCAATCTAATTCAAATCAAGAGTTTCACATATCTAAAAGGAGTCTCCACCAATATTGTATTCAACATAATCTAAGCAGGTTTAAGATACCAAAGATGTTTGTACTGTGGGGAAAGCCTTTTCCACTCACTACCACAGGAAAAGTAAGAAGAGACCAAATCCACAAGGAATTAATGTGCCGGCTACAATCTTTGCATATTAAAGTTACAAACGTCAACTATTATGTTTCAATTAAAGTCATGAGGGTCAAAATATAA 1680 0.4244 MPMFESLADSPATCSGHNCRSPEKDGERACGASSGLGSRLARPSDWYLEWLLAIAFVGGIAAPLNYRWGFEEAKFAMTVVKPVMLVTDESSQTWYSKLLKTDVPSLRWHALLDSTSSDLAKQWNDIAVLHSEMLKKHRVKPLPFDYSWAPDGAVMICFTSGTTGKPKGVTLSHGALIVQSLAKIAIVGYNEDDVYLHTTPLCHIGGLSSALTMLMVGGCHVLMPKFDPKLAVDAIERYGVTSLITVPAIMAGLISLIRHKETWKGGETVKKILNGGGSLTLELIKDTNLFFRKAKLISAYGMTETCSSMTFMNLYDPMHETTISQNLQIVGEAASSNSIHQPQGICVGKAAPHVELKICEDDGTSHIGRILTRGPHTMLRYWDQTLTSSSNGRSEAWFDTGDIGSIDNHGNLWLLGRTNGRIKSGGENIYPEEVEAILQGHPGITSVVVVGIPDAYLTEMVAACIQLTENWQWLDQSNSNQEFHISKRSLHQYCIQHNLSRFKIPKMFVLWGKPFPLTTTGKVRRDQIHKELMCRLQSLHIKVTNVNYYVSIKVMRVKI* 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g1113 559 Gene3D - 17 417 IPR042099 -
Amo14g1113 559 CDD AFD_class_I 151 524 - -
Amo14g1113 559 SUPERFAMILY Acetyl-CoA synthetase-like 40 532 - -
Amo14g1113 559 MobiDBLite consensus disorder prediction 1 37 - -
Amo14g1113 559 ProSitePatterns Putative AMP-binding domain signature. 156 167 IPR020845 -
Amo14g1113 559 PANTHER ACYL-COA SYNTHETASE 42 531 - -
Amo14g1113 559 Pfam AMP-binding enzyme C-terminal domain 433 522 IPR025110 -
Amo14g1113 559 Gene3D - 420 534 IPR045851 -
Amo14g1113 559 PANTHER ACYL-COA SYNTHETASE FAMILY MEMBER 2, MITOCHONDRIAL 42 531 - -
Amo14g1113 559 Pfam AMP-binding enzyme 41 424 IPR000873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g1113 Amo-Chr14 17361085 17366815 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo14g1113 51 451 Monolignol Biosynthesis Gene Families AT3G21240 29.126 9.30e-35 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g1113 K14760 - gmx:100809925 782.711
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo14g1113 14 17361085 17366815 Amo14g1113 14 17361085 17366815 ECH