Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g1098 ATGCCAATGTTTGAGTCGCTTGCTGACTCTCCGGCTACATGTTCCGGTCACAATTGCCGGTCACCGGAAAATGACTGGGCGAGAGCTTGTGGAGCAAGTTCTGGCCTTGGCTCAAGGCTTGCTCGACCTAGTGATTGGTATCTCGAGTGGTTGTTAGCCATTGCGTTTGTTGGTGGAATAGCCGCACCTCTGAACTATCGCTGGAGTTTTGAAGAGGCGAAATTCGCAATGACTGTGGTGAAGCCAGTGATGTTAGTCACTGATGAGAGCAGCCAAACATGGTACTCAAAACTTCTGAAAACGGATGTTCCATCTCTGAGATGGCATGCTTTATTGGATTCCACTTCCTCAGATTTAGCAAAGGAGTGGAATGGTATTGCTGGGTTGCACTCAGAAATGCTCAAGAAGCATCACGTAAAGCCTCTACCATTTGATTATTCCTGGGCGCCTGATGGTGCTGTAATGATATGCTTTACTTCAGGAACAACAGGAAAGCCTAAAGGAGTAACACTAAGCCATGGAGCATTGATCGTACAATCACTGGCAAAGATTGCCATAGTTGGATACAATGAGGATGATGTTTATCTGCATACTACTCCATTATGCCATATTGGGGGATTGTCATCGGCTTTAACCATGCTTATGGTTGGAGGTTGCCATGTCTTGATGCCGAAGTTCGATCCAAAATCAGCTGTTGATGCCATAGAGCGATACGGGGTGACATCTCTGATCACAGTCCCTGCAATAATGGCCAAGACATGGAAAGGGGGAGAAACCGTAAAGAAAATACTTAATGGGGGTGGAAGCCTCTCACTTGAGCTCATCAAGGATACTAACTTATTCTTCCATAAAGCTAAGCTTATCTCAGCTTATGGGATGACAGAGACATGTTCTTCAATGACATTCATGAACCTTTATGATCCAATGCATGAAACCACCATTAGCCAGAACCTTCAAATAGTTGGTGAGGCAGCATCATCAAATTCCATTCACCAGCCTCAAGGTATATGTGTTGGCAAAGCTGCACCTCATGTAGAACTTAAAATATGCGAAGATGATGGCACTAGTCACATAGGGAGAATTTTAACTAGAGGACCACACACAATGCTCAGGTATTGGGATCAAACTCTCACAAGTTCATCAAATGGCAGGAGTGAAGCATGGTTTGATACAGGTGACATTGGATCAATTGATAATCATGGTAATTTGTGGCTCCTTGGACGAACAAATGGTCGAATCAAGAGTGGTGGGGAGAACATTTACCCTGAAGAGGTTGAAGCAATTCTACAAGGACATCCAGGGATTACAAGTGTTGTTGTTGTAGGAATCCCAGATGCCTATCTTACAGAAATGGTAGCAGCATGTATCCAACTAACAGAAAATTGGCAATGGTTAGATCAATCTAATTCAAATCAAGAGTTTTACATATCTAAAAAGAGTCTCCACCAATATTGTATTCAACATAATCTAAGCAGGTTTAAGATACCAAAGATGTTTGTACTGTGGGGAAAGCCTTTTCCACTCACTACCACAGGAAAAGTAAGAAGAGACCAAATCCGCAAGGAATTAATGTGTCGGCTACAATCTTTGCATAGTAATCTTTGA 1605 0.4299 MPMFESLADSPATCSGHNCRSPENDWARACGASSGLGSRLARPSDWYLEWLLAIAFVGGIAAPLNYRWSFEEAKFAMTVVKPVMLVTDESSQTWYSKLLKTDVPSLRWHALLDSTSSDLAKEWNGIAGLHSEMLKKHHVKPLPFDYSWAPDGAVMICFTSGTTGKPKGVTLSHGALIVQSLAKIAIVGYNEDDVYLHTTPLCHIGGLSSALTMLMVGGCHVLMPKFDPKSAVDAIERYGVTSLITVPAIMAKTWKGGETVKKILNGGGSLSLELIKDTNLFFHKAKLISAYGMTETCSSMTFMNLYDPMHETTISQNLQIVGEAASSNSIHQPQGICVGKAAPHVELKICEDDGTSHIGRILTRGPHTMLRYWDQTLTSSSNGRSEAWFDTGDIGSIDNHGNLWLLGRTNGRIKSGGENIYPEEVEAILQGHPGITSVVVVGIPDAYLTEMVAACIQLTENWQWLDQSNSNQEFYISKKSLHQYCIQHNLSRFKIPKMFVLWGKPFPLTTTGKVRRDQIRKELMCRLQSLHSNL* 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g1098 534 Pfam AMP-binding enzyme 41 415 IPR000873 -
Amo14g1098 534 Pfam AMP-binding enzyme C-terminal domain 424 513 IPR025110 -
Amo14g1098 534 Gene3D - 8 408 IPR042099 -
Amo14g1098 534 CDD AFD_class_I 151 515 - -
Amo14g1098 534 Gene3D - 411 526 IPR045851 -
Amo14g1098 534 ProSitePatterns Putative AMP-binding domain signature. 156 167 IPR020845 -
Amo14g1098 534 PANTHER ACYL-COA SYNTHETASE 42 522 - -
Amo14g1098 534 SUPERFAMILY Acetyl-CoA synthetase-like 40 524 - -
Amo14g1098 534 PANTHER ACYL-COA SYNTHETASE FAMILY MEMBER 2, MITOCHONDRIAL 42 522 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g1098 Amo-Chr14 17128602 17133230 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo14g1098 51 442 Monolignol Biosynthesis Gene Families AT3G21240 28.606 3.10e-34 133
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g1098 K14760 - gmx:100809925 774.237