Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g1093 ATGGCACTTTCTATGCACAAGGACGCGTCAAATAGCATGGATTCAAGCAAGTACGTGAGGTACACACCTGAACAAGTTGAGGCTTTGGAAAGGGTCTATGCTGAATGTCCAAAGCCTTCTTCTTTGAGAAGACAACAACTCATCAGAGAGTGCCCAATCCTCTCAAACATTGAGCCTAAACAGATCAAAGTCTGGTTCCAGAACCGAAGATGCCGTGAGAAGCAAAGGAAAGAAGCCTCTCGCCTGCAGACAGTGAATAGAAAGCTGACTGCAATGAACAAGCTGTTGATGGAGGAGAATGACCGRTTGCAGAAGCAGGTCTCCCATTTGGTCTATGAAAATGGATATATGAAGCAACAAATTCATACTGCATCTGCTACTACTACCACAGACAATAGCTGTGAGTCTGTTGTGATGAGTGGTCAGAACCAACAACAGCAAAACCCAACACCTCAGCATCCCCAAAGGGATGCTAACAACCCAGCTGGTCTTCTCGCCATAGCTGAGGAGACCCTGGCAGAGTTCCTTTCCAAGGCTACTGGAACTGCTGTCGACTGGGTCCAGATGATTGGGATGAAGCCTGGTCCGGATTCTATTGGAATCGTTGCTGTTTCCCGCAACTGTAGTGGTGTGGCAGCACGAGCCTGCGGCCTTGTGAGTCTAGAACCCACAAAGGTTGCTGAGATTCTCAAAGATCGACCATCATGGTACCGCGACTGTCGGTGCCTTGATGTGTTGAGCATTGTTCCTACAGGGAGTGGGGGCACTATAGAGCTCATATATATGCAGACTTACGCGCCAACTACTTTGGCAGCAGCGCGTGACTTCTGGACAGTAAGATACACTACAAGTTTGGAAGATGGAAGTCTTGTGATTTGTGAGAGATCATTGACATCTTCGACCGGCGGCCCTACAGGGCCTCCTTCTTCAAACTTTGTAAGAGCTGAGATGCTTCCCAGTGGTTATCTAATTAGACCCTGCGAGGGTGGTGGCTCCATTATTCATATTGTAGATCATGTTGATTTAGATGTCTGGAGTGTTCCTGAAGTACTGAGGCCGCTTTACGAATCTTCAAAAATCTTGGCCCAGAAATTGACCATTGCAGCCCTGCAACATATAAGACAGATTGCACAAGAATCTAGCGGAGAAATTCAGTATGGTGGGGGACGCCAGCCTGCTGTGTTAAGGACATTTAGCCAGAGACTCTGCCGGGGGTTCAATGATGCTGTTAATGGGTTTGTGGAGGATGGTTGGTCACTGCTGGGCAATGATGGGGTAGAAGATGTGACTATAGCTATAAACTCATCTCCCAACAAATTTTTGGGGTCCCAGTACAATTCATCAATGTTCCCAGCTTTTGGAGGTGGGGTTCTGTGTGCCAAGGCATCCATGCTGTTGCAGAATGTTCCTCCGGCYTTGCTTGTTCGATTCTTGAGGGAGCATCGGTCTGAGTGGGCTGATTATGGTGTTGATGCATACTCTGCTGCATGTCTTAAGGCTACTCCCTATGCTGTTCCTTGTGCAAGACCTGGTGGCTTCCCAAGCACCCAGGTCATTTTACCACTTGCTCATACTATTGAGCATGAGGAGTTCTTGGAGGTAGTTCGGATAGAGGGTCATGCATTTTCCCCTGAAGATGTTGCATTGGCACGTGATATGTATTTGCTTCAGCTTTGCAGTGGGGTTGATGAAAATGCAATTGGAGCTTGTGCTCAATTGGTATTTGCACCTATTGATGAATCATTTGCTGATGATGCTCTTCTACTTCCTTCTGGATTCCGCGTCATACCATTAGATCCCAAAACAGATACTCCAACCACAACAAGGACATTAGATTTGGCATCCACACTTGAAGTAGGTTCTGGGAATACACGTGCAGCCGGAGAAGCCGATGATTACAATCTTCGGTCAGTCCTTACTATTGCATTCCAATTCACCTTTGAGAACCATTTGCGCGACAATGTGGCTGCCATGGCTCGCCAGTATGTGCGTAGTGTTGTGGGGTCGGTTCAGAGGGTTGCAATGGCAATTGCTCCATCTCGGCTCAGTACTCAACTGGGGCCAAAGTCTCTCCCTGGTTCACCGGAGGCTCTTACTTTGGCAAGATGGATCAGCCGAAGCTACCGAGTCCACACTGGTTCAGACCTTTTTCGGGTTGARTCAACTGCTGGTGATGCAATCTTGAAGCAACTTTGGCAACATTCTGATGCAATCATGTGCTGTTCTGTGAAAACAAATGCATCTCCGGTATTCACCTTTGCAAACCAAGCCGGACTTGACATGCTCGAAACCACTCTTGTCGCCCTTCAAGACATTATGCTCGACAAAGTTCTTGATGAATCTGGCAGGAAGATTCTTTGCTCTGAGTTCTCCAAGATTATGCAACAGGGTTTTGCATATCTACCAGCAGGAATATGTGCTTCCAGCATGAACAGGCCAGTGTCCTATGACCAAGCAATTGCATGGAAAGTTCTCAATGATGATGACTCCAATCACTGCTTGGCTTTCATGTTCATGAACTGGTCCTTTGTCTAA 2535 0.4722 MALSMHKDASNSMDSSKYVRYTPEQVEALERVYAECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSHLVYENGYMKQQIHTASATTTTDNSCESVVMSGQNQQQQNPTPQHPQRDANNPAGLLAIAEETLAEFLSKATGTAVDWVQMIGMKPGPDSIGIVAVSRNCSGVAARACGLVSLEPTKVAEILKDRPSWYRDCRCLDVLSIVPTGSGGTIELIYMQTYAPTTLAAARDFWTVRYTTSLEDGSLVICERSLTSSTGGPTGPPSSNFVRAEMLPSGYLIRPCEGGGSIIHIVDHVDLDVWSVPEVLRPLYESSKILAQKLTIAALQHIRQIAQESSGEIQYGGGRQPAVLRTFSQRLCRGFNDAVNGFVEDGWSLLGNDGVEDVTIAINSSPNKFLGSQYNSSMFPAFGGGVLCAKASMLLQNVPPALLVRFLREHRSEWADYGVDAYSAACLKATPYAVPCARPGGFPSTQVILPLAHTIEHEEFLEVVRIEGHAFSPEDVALARDMYLLQLCSGVDENAIGACAQLVFAPIDESFADDALLLPSGFRVIPLDPKTDTPTTTRTLDLASTLEVGSGNTRAAGEADDYNLRSVLTIAFQFTFENHLRDNVAAMARQYVRSVVGSVQRVAMAIAPSRLSTQLGPKSLPGSPEALTLARWISRSYRVHTGSDLFRVESTAGDAILKQLWQHSDAIMCCSVKTNASPVFTFANQAGLDMLETTLVALQDIMLDKVLDESGRKILCSEFSKIMQQGFAYLPAGICASSMNRPVSYDQAIAWKVLNDDDSNHCLAFMFMNWSFV* 845
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g1093 844 SUPERFAMILY Homeodomain-like 17 79 IPR009057 -
Amo14g1093 844 SUPERFAMILY Bet v1-like 415 601 - -
Amo14g1093 844 Pfam Homeodomain 17 75 IPR001356 GO:0003677
Amo14g1093 844 Pfam MEKHLA domain 699 843 IPR013978 -
Amo14g1093 844 ProSiteProfiles START domain profile. 157 358 IPR002913 GO:0008289
Amo14g1093 844 Gene3D - 185 378 IPR023393 -
Amo14g1093 844 Pfam START domain 167 374 IPR002913 GO:0008289
Amo14g1093 844 SMART START_1 166 376 IPR002913 GO:0008289
Amo14g1093 844 MobiDBLite consensus disorder prediction 132 159 - -
Amo14g1093 844 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14 6 844 - -
Amo14g1093 844 SMART HOX_1 14 80 IPR001356 GO:0003677
Amo14g1093 844 CDD bZIP 69 108 - -
Amo14g1093 844 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14 6 844 IPR044830 GO:0003700
Amo14g1093 844 CDD homeodomain 17 77 IPR001356 GO:0003677
Amo14g1093 844 Coils Coil 86 106 - -
Amo14g1093 844 MobiDBLite consensus disorder prediction 132 157 - -
Amo14g1093 844 Gene3D - 8 83 - -
Amo14g1093 844 SUPERFAMILY Bet v1-like 167 378 - -
Amo14g1093 844 ProSiteProfiles 'Homeobox' domain profile. 12 76 IPR001356 GO:0003677
Amo14g1093 844 CDD START_ArGLABRA2_like 161 377 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g1093 Amo-Chr14 17057350 17062972 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo14g1093 1 844 Homeobox Transcription Factor Family AT2G34710 80.491 0.0 1409
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Amo14g1093 START 2e-52 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g1093 K09338 - gmx:100807428 1556.58