Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g1087 ATGGCACTTTCTATGCACAAGGACGCGTCAAATAGCATGGATTCAAGCAAGTACGTGAGGTACACACCTGAACAAGTCGAGGCTTTGGAAAGGGTCTATGCTGAATGTCCAAAGCCTTCTTCTTTGAGAAGACAACAACTCATCAGAGAGTGCCCAATCCTCTCAAACATTGAGCCTAAACAGATCAAAGTCTGGTTCCAGAACCGAAGATGCCGTGAGAAGCAAAGGAAAGAAGCCTCTCGCCTGCAGACAGTGAATAGAAAGCTGACTGCAATGAACAAGCTGTTGATGGAGGAGAATGACCGRTTGCAGAAGCAGGTCTCCCATTTGGTCTATGAAAATGGATATATGAAGCAACAAATTCATACTGCATCTGCTACTACTACCACAGACAATAGCTGTGAGTCTGTTGTGATGAGTGGTCAGAACCAACAACAGCAAAACCCAACACCTCAGCATCCCCAAAGGGATGCTAACAACCCAGCTGGTCTTCTCGCCATAGCTGAGGAGACCCTGGCAGAGTTCCTTTCCAAGGCTACTGGAACTGCTGTCGACTGGGTCCAGATGATTGGGATGAAGCCTGGTCCGGATTCTATTGGAATCGTTGCTGTTTCCCGCAACTGTAGCGGTGTGGCAGCACGAGCCTGCGGCCTTGTGAGTCTAGAACCCACAAAGGTTGCTGAGATTCTCAAAGATCGACCATCATGGTACCGCGACTGTCGGTGCCTTGATGTGTTGAGCATTGTTCCTACAGGGAGTGGGGGCACTATAGAGCTCATATATATGCAGACTTACGCGCCAACTACTTTGGCAGCAGCGCGCGACTTCTGGACAGTAAGATACACTACAAGTTTGGAAGATGGAAGTCTTGTGATTTGTGAGAGATCATTGACATCTACGACGGGCGGCCCTACAGGGCCTCCTTCTTCAAACTTTGTAAGAGCTGAGATGCTTCCCAGTGGTTATCTAATTAGACCCTGCGAGGGTGGTGGCTCCATTATTCATATTGTAGACCATGTTGATTTAGATGTCTGGAGTGTTCCTGAAGTACTGAGGCCGCTTTACGAATCTTCAAAAATCTTGGCCCAGAAATTGACCATTGCAGCCCTGCAACATATAAGACAGATTGCACAAGAATCTAGCGGAGAAATTCAGTATGGTGGGGGAMGCCAGCCTRCTGTGTTRAGGACATTTAGCCAGAGACTMTGCCGGGGGTTCAATGATGCTGTTAATGGGTTTGTGGAGGATGGTTGGTCACTGCTGGGCAATGATGGGGTAGAAGATGTGACTATAGCTATAAACTCATCTCCCAACAAATTTTTGGGGTCCCAGTACAATTCATCAATGTTCCCAGCTTTTGGAGGTGGGGTTCTGTGTGCCAAGGCATCCATGCTGTTGCAGAATGTTCCTCCGGCCTTGCTTGTTCGATTCTTGAGGGAGCATCGGTCTGAGTGGGCTGATTATGGTGTTGATGCATACTCTGCTGCATGTCTTAAGGCTACTCCCTATGCTGTTCCTTGTGCAAGACCTGGTGGTTTCCCAAGCACCCAGGTCATTTTACCACTTGCTCATACTATTGAGCATGAGGAGTTCTTGGAGGTAGTTCGGATAGAGGGTCATGCATTTTCCCCTGAAGATGTTGCATTGGCACGCGATATGTATTTGCTTCAGCTTTGCAGTGGGGTTGATGAAAATGCAATTGGAGCTTGTGCTCAATTGGTATTTGCACCTATTGATGAATCATTTGCTGATGATGCTCTTCTACTTCCTTCTGGATTCTGCGTCATACCATTGGATCCTAAAACAGATACTCCAACCACAACAAGGACATTAGATTTGGCATCCACACTTGAAGTAGGTTCTGGGAATACACGTGCAGCCGGAGAAGCCGATGATTACAATCTTCGGTCAGTCCTAACCATTGCATTTCAATTCACCTTTGAGAACCATTTGCGCGACAATGTAGCTGCCATGGCTCGCCAGTATGTGCGTAGTGTTGTGGGGTCGGTTCAGAGGGTTGCAATGGCAATTGCTCCATCACGGCTCAGTACTCAACTGGGGCCAAAGTCTCTCCCTGGTTCACCGGAGGCTCTTACTTTAGCAAGATGGATCAGCCGAAGCTACCGAGTCCACACTGGTTCAGACCTTTTTCGGGTTGARTCAACTGCTGGTGATGCAATCTTGAAGCAACTTTGGCAACATTCTGATGCAATCATGTGCTGTTCTGTGAAAACAAATGCATCTCCGGTATTCACCTTTGCAAACCAAGCCGGACTTGACATGCTCGAAACTACTCTTGTCGCCCTTCAAGACATTATGCTCGACAAAGTTCTTGATGAATCTGGCAGGAAGATTCTTTGCTCTGAGTTCTCCAAGATTATGCAACAGGTAATTAACAAATAA 2403 0.4715 MALSMHKDASNSMDSSKYVRYTPEQVEALERVYAECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSHLVYENGYMKQQIHTASATTTTDNSCESVVMSGQNQQQQNPTPQHPQRDANNPAGLLAIAEETLAEFLSKATGTAVDWVQMIGMKPGPDSIGIVAVSRNCSGVAARACGLVSLEPTKVAEILKDRPSWYRDCRCLDVLSIVPTGSGGTIELIYMQTYAPTTLAAARDFWTVRYTTSLEDGSLVICERSLTSTTGGPTGPPSSNFVRAEMLPSGYLIRPCEGGGSIIHIVDHVDLDVWSVPEVLRPLYESSKILAQKLTIAALQHIRQIAQESSGEIQYGGGXQPXVLRTFSQRLCRGFNDAVNGFVEDGWSLLGNDGVEDVTIAINSSPNKFLGSQYNSSMFPAFGGGVLCAKASMLLQNVPPALLVRFLREHRSEWADYGVDAYSAACLKATPYAVPCARPGGFPSTQVILPLAHTIEHEEFLEVVRIEGHAFSPEDVALARDMYLLQLCSGVDENAIGACAQLVFAPIDESFADDALLLPSGFCVIPLDPKTDTPTTTRTLDLASTLEVGSGNTRAAGEADDYNLRSVLTIAFQFTFENHLRDNVAAMARQYVRSVVGSVQRVAMAIAPSRLSTQLGPKSLPGSPEALTLARWISRSYRVHTGSDLFRVESTAGDAILKQLWQHSDAIMCCSVKTNASPVFTFANQAGLDMLETTLVALQDIMLDKVLDESGRKILCSEFSKIMQQVINK* 801
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g1087 800 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HOX32 13 797 - -
Amo14g1087 800 MobiDBLite consensus disorder prediction 132 163 - -
Amo14g1087 800 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14 13 797 IPR044830 GO:0003700
Amo14g1087 800 SUPERFAMILY Bet v1-like 415 602 - -
Amo14g1087 800 SUPERFAMILY Homeodomain-like 17 79 IPR009057 -
Amo14g1087 800 ProSiteProfiles START domain profile. 157 358 IPR002913 GO:0008289
Amo14g1087 800 Pfam Homeodomain 17 75 IPR001356 GO:0003677
Amo14g1087 800 SMART HOX_1 14 80 IPR001356 GO:0003677
Amo14g1087 800 CDD bZIP 69 108 - -
Amo14g1087 800 CDD homeodomain 17 77 IPR001356 GO:0003677
Amo14g1087 800 Pfam START domain 167 374 IPR002913 GO:0008289
Amo14g1087 800 Coils Coil 86 106 - -
Amo14g1087 800 Pfam MEKHLA domain 699 796 IPR013978 -
Amo14g1087 800 Gene3D - 8 83 - -
Amo14g1087 800 SMART START_1 166 376 IPR002913 GO:0008289
Amo14g1087 800 MobiDBLite consensus disorder prediction 132 157 - -
Amo14g1087 800 SUPERFAMILY Bet v1-like 167 378 - -
Amo14g1087 800 ProSiteProfiles 'Homeobox' domain profile. 12 76 IPR001356 GO:0003677
Amo14g1087 800 CDD START_ArGLABRA2_like 161 377 - -
Amo14g1087 800 Gene3D - 185 378 IPR023393 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g1087 Amo-Chr14 16815684 16820778 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo14g1087 1 796 Homeobox Transcription Factor Family AT2G34710 80.322 0.0 1317
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Amo14g1087 START 7.6e-53 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g1087 K09338 - gmx:100779499 1452.96