Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g1072 ATGTTCTTGCAATTGATTTTGATCAGATGGAATTCACAAAAGGAAATAAGGGTTGCGACACGATGGAAGGAAGCCAAAGGGAGGAGGGGTGTAGAACAAGATATAATAAGAAAAGTCTTTCGAAGTGAGGAAAGAGCATATGATTTTTACAGTAAATTTGGCAGATGTCATGGATTTGGCGTGCGCAAGGGTGATTATGGAAAGGATGAAGAAGGAAATTTGATAAGGAGAAGGTTTTTTTGTAATAGGGCCGGACTGAGAGATGAGAAACACTTGAACAGGTTGGATAGAAAAAGGGGACACCGTCCTGAAACAAGGACTAATTGCTTGGCGAAGCTGTCGATTTATCTGGATAGGGAAAACTCAACATGGAAGGTTCGCAAAGTAATCTTGGATCACAATCATGAACTGACACCTCGAAGGATGGTGCACATGATTCCGAAATTCCGTCGTATATCGGATGCTGCAAAGGCAAACATAGATGGCATGCGTGGACATAGTATTTTGGAATTGGTGCAAAATTTGGAGTTGGTAGTCCGAGAATACCGCAACAACGAGCTAGTTGCGCAATTCAATTCAATATATAGCACCCCTGTTCTAACAACGTGTCTGGATCCTATTGAGAGGTGCGCTGCAGATGTTTACACGAGAGCTATTTTTGTACTAGTTAAGAAAGAGATTGACGGTGTTGGAGCGGTTAATTTTGTGAGTAAAAGGAGGGTCTCCACAACAATGAAGGAGGGCTTTCCATGCAGACACATATTCTTTGTCATGAAGCACGAGCATTTAAAGGATATTCCAAATCGTTTAATTCTGAAGCGGTGGAGGAGGGACGCCAAGGCAATTGAAGAGTACGGCGATAAGACCGACGACATGTTGAGCGAGAGAGGTTTTCTATTGCGGCATGGGGCACTCCATGCGGCATCACAGTGGATGTTATACCTTGGTTCAAAGAATCGAACTGTATTTAAGACTGCAATGGAGGGAATTCGCGGAATTTGTACTGACATCCATGCAATACTTGGTCAACCGAATGAGGGAAGAAAAGCAAATGCGGACGAGCACATTCGGGATCCCGTTGTTGTTAGAACTAAAGGTGCTCCACGGTCCAAAGGCAAAAAGGGAAAGAAGAGGAGATGTACGTTTTGCAAAAGGACCGGCCACACAAAGCGGACATGTCTTGATAGGGTACCAAACCGATCCAAATGGGGTTTGCAAGAGGATGAAGAATCTGTCGAAATACCAGGGGCCAACGAGGAGAGGATCGTCGGAACTGCACAAAGTGAGATTCTAGCATCTGTTGCAGATGTAGGCAGTTGCGACTATCACCAACAGATGGTCATGCTTTGGCTGCTGCTGGTGGCCAGTGAAACAACTTCGGCGACAGATTTTTTCGCCGACTTCGTTCTCGTTGTGCTGGATTTTTGA 1428 0.4468 MFLQLILIRWNSQKEIRVATRWKEAKGRRGVEQDIIRKVFRSEERAYDFYSKFGRCHGFGVRKGDYGKDEEGNLIRRRFFCNRAGLRDEKHLNRLDRKRGHRPETRTNCLAKLSIYLDRENSTWKVRKVILDHNHELTPRRMVHMIPKFRRISDAAKANIDGMRGHSILELVQNLELVVREYRNNELVAQFNSIYSTPVLTTCLDPIERCAADVYTRAIFVLVKKEIDGVGAVNFVSKRRVSTTMKEGFPCRHIFFVMKHEHLKDIPNRLILKRWRRDAKAIEEYGDKTDDMLSERGFLLRHGALHAASQWMLYLGSKNRTVFKTAMEGIRGICTDIHAILGQPNEGRKANADEHIRDPVVVRTKGAPRSKGKKGKKRRCTFCKRTGHTKRTCLDRVPNRSKWGLQEDEESVEIPGANEERIVGTAQSEILASVADVGSCDYHQQMVMLWLLLVASETTSATDFFADFVLVVLDF* 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g1072 475 Pfam FAR1 DNA-binding domain 48 138 IPR004330 -
Amo14g1072 475 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 39 158 IPR031052 GO:0006355
Amo14g1072 475 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 247 285 IPR031052 GO:0006355
Amo14g1072 475 SUPERFAMILY Retrovirus zinc finger-like domains 366 401 IPR036875 GO:0003676|GO:0008270
Amo14g1072 475 PANTHER OS03G0181600 PROTEIN 39 158 - -
Amo14g1072 475 PANTHER OS03G0181600 PROTEIN 247 285 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g1072 Amo-Chr14 16350148 16354611 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo14g1072 FAR1 4.4e-19 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g1072 - - aip:107607282 316.62