Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g1039 ATGAAGGAACAAGGTGGTGGTGGAGGGAGGAAGCAGGGTGCAGCATCACCATGTGCAGCATGCAAGCTTCTAAGGAGAAGGTGTGCACAAGATTGTGTATTTGCTCCCTATTTCCCAGCTGATGAACCCCACAAGTTTGCTAATGTTCATAGAGTCTTTGGTGCCAGCAATGTCAACAAGATGCTTCAGGACCTTCCAATGCATCAAAGAAGGGATGCAGTGAGTAGCATGGTGTATGAGGCCAATGCTAGAGTCCGAGACCCTGTTTATGGTTGTGTAGGTGCAATTTCTTCTCTTCAACAACAAATTGATGTGCTACAAGCCCAATTGGCCATAGCCCAAGCTGAGGTGGTCCACCTTAAGATGCGCCAACCCAATTACATTTCTAATGGGATGGGCCCCAATAGCCCAACCAATAGTGGGTCCCCACCATCGAAAGTTATGGACTCACAGGCCAAGCCTATTTTTGGCATGGACATGGTGGTGGACCAGACCAGCTATGATGATTCAATGTGGTCATAA 522 0.4789 MKEQGGGGGRKQGAASPCAACKLLRRRCAQDCVFAPYFPADEPHKFANVHRVFGASNVNKMLQDLPMHQRRDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDVLQAQLAIAQAEVVHLKMRQPNYISNGMGPNSPTNSGSPPSKVMDSQAKPIFGMDMVVDQTSYDDSMWS* 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g1039 173 MobiDBLite consensus disorder prediction 128 150 - -
Amo14g1039 173 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 9 163 - -
Amo14g1039 173 Pfam Lateral organ boundaries (LOB) domain 17 114 IPR004883 -
Amo14g1039 173 Coils Coil 96 123 - -
Amo14g1039 173 MobiDBLite consensus disorder prediction 128 147 - -
Amo14g1039 173 PANTHER LOB DOMAIN-CONTAINING PROTEIN 3 9 163 - -
Amo14g1039 173 ProSiteProfiles LOB domain profile. 16 117 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g1039 Amo-Chr14 15611377 15615610 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo14g1039 1 173 AS2 family AT1G31320 74.857 2.41e-73 216
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Amo14g1039 LOB 7.6e-44 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g1039 - - gmx:100794219 268.085