Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g1013 ATGGTGAAATCGTCACAATATGAAAGATTCTCAAAGGATTTTGTAATGGGAGGGGTAGCAGCAATCATATCGAAGAGTGCCATGGCACCAATCGAGAGAGTGAAACTTCTATTGCAAAACCAAGCTGAAATTATTAAAAGAGGGCAACTCAAGAAACCATACATGGGTGTGTGTGATGGATTTAAGAGGGTGTTTGCTGAAGAGGGTGTCATTGCCTTTTGGAGAGGTAACCAAGCCAATGCTTTCAATTTTGCATTCAAAGGTTACTTCAAAAGCATTTTTGGGCAATCCAAAGAGAGAGATGGGTACATTAAGTGGTTTGCTGGAAATGTGGCTTCAGGAAGTGCCGCAGGAGCAACTACTTCACTGCTTCTTTATCATTTAGATTATGCACGAACACGATTGGGCACTGATGCATTGGAGTGCTGTGCTACCGGTCAGCGCCAGTTTAAGGGGCTAGTTGATGTGTACCGTAAAACCTTGTTAAGTGATGGAGTTGTTGGCTTGTACAGGGGATTTGGGGTGTCAATAGTGGGAATCACAATGTACCGAGGAATGTACTTCGGGATCTATGACACCGTGAAGCCTGTCATTTTAGTTGGGCCTTTCAAGGGAAATTTCTTTGCTAGTTTCTTCTTAGGTTGGAGCATTACAACATCAGCAGGGGTTTGTGCATACCCGTTCGACACACTGCGTCGGAGAATGATGCTAACATCTGGACAACCAAACAAGTATTATAACGCAAGGCATGCATTTCGTGAGATTGTTCGTTAA 774 0.4341 MVKSSQYERFSKDFVMGGVAAIISKSAMAPIERVKLLLQNQAEIIKRGQLKKPYMGVCDGFKRVFAEEGVIAFWRGNQANAFNFAFKGYFKSIFGQSKERDGYIKWFAGNVASGSAAGATTSLLLYHLDYARTRLGTDALECCATGQRQFKGLVDVYRKTLLSDGVVGLYRGFGVSIVGITMYRGMYFGIYDTVKPVILVGPFKGNFFASFFLGWSITTSAGVCAYPFDTLRRRMMLTSGQPNKYYNARHAFREIVR* 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g1013 257 PRINTS Adenine nucleotide translocator signature 105 118 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Amo14g1013 257 PRINTS Adenine nucleotide translocator signature 79 91 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Amo14g1013 257 PRINTS Adenine nucleotide translocator signature 10 22 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Amo14g1013 257 PRINTS Adenine nucleotide translocator signature 54 75 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Amo14g1013 257 PRINTS Adenine nucleotide translocator signature 210 226 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Amo14g1013 257 PANTHER ADP,ATP CARRIER PROTEIN 1-RELATED-RELATED 5 257 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Amo14g1013 257 ProSiteProfiles Solute carrier (Solcar) repeat profile. 8 101 IPR018108 -
Amo14g1013 257 PANTHER ADP,ATP CARRIER PROTEIN ER-ANT1 5 257 - -
Amo14g1013 257 Gene3D Mitochondrial carrier domain 11 257 IPR023395 -
Amo14g1013 257 SUPERFAMILY Mitochondrial carrier 8 257 IPR023395 -
Amo14g1013 257 ProSiteProfiles Solute carrier (Solcar) repeat profile. 105 197 IPR018108 -
Amo14g1013 257 Pfam Mitochondrial carrier protein 9 83 IPR018108 -
Amo14g1013 257 Pfam Mitochondrial carrier protein 106 198 IPR018108 -
Amo14g1013 257 Pfam Mitochondrial carrier protein 206 257 IPR018108 -
Amo14g1013 257 PRINTS Mitochondrial carrier protein signature 26 40 IPR002067 GO:0055085
Amo14g1013 257 PRINTS Mitochondrial carrier protein signature 170 188 IPR002067 GO:0055085
Amo14g1013 257 PRINTS Mitochondrial carrier protein signature 13 26 IPR002067 GO:0055085
Amo14g1013 257 PRINTS Mitochondrial carrier protein signature 214 236 IPR002067 GO:0055085
Amo14g1013 257 PRINTS Mitochondrial carrier protein signature 120 138 IPR002067 GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g1013 Amo-Chr14 15171947 15173787 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo14g1013 8 257 Antiporters AT5G17400 74.419 5.69e-137 386
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g1013 K05863 - gmx:100776735 429.483