Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g1003 AGGTTCACGCTAAGGTCCCATGGAAAGCTTGTTCGTGATTTCAAGCACCTCAACCTCGATTTCCAGCTCATCAAGGACGACAATGCCCAGAAGAAGCTTAAGATCGACGCTTGGTTTGGCTCTCGCAAGACCTCTGCCGCCATCCGCACTGCCCTCAGCCAGAACTTCATCACTGGCGTTACTAAGGGATACCGTTATAAGAGGAGGTTCGTCTATGCTCACTTTCCGATTAACGCCAGCATCTCCAACAACAACTCCTCCATCGAGATCCGCAACTTCCTTGACGAAGAGAAGGTGAGGAAGGTGAACATGTTTGAGGGAATGTCTTTGCTTAAAGATAAGCTCGTTTTGGATGGAAATGACATTGAGCTTGTATCAAGATACCATGTGAAAAACAAGGATATTAGGAAGTTCTTTGACGGTATCTATGTCAACGAGAAGGGAACAATAGCTGAAGAGTAG 462 0.4632 RFTLRSHGKLVRDFKHLNLDFQLIKDDNAQKKLKIDAWFGSRKTSAAIRTALSQNFITGVTKGYRYKRRFVYAHFPINASISNNNSSIEIRNFLDEEKVRKVNMFEGMSLLKDKLVLDGNDIELVSRYHVKNKDIRKFFDGIYVNEKGTIAEE* 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g1003 153 Gene3D - 5 65 IPR036789 GO:0003735|GO:0005840|GO:0006412|GO:0019843
Amo14g1003 153 Gene3D - 66 153 IPR036789 GO:0003735|GO:0005840|GO:0006412|GO:0019843
Amo14g1003 153 PANTHER 60S/50S RIBOSOMAL PROTEIN L6/L9 6 153 IPR000702 GO:0003735|GO:0005840|GO:0006412|GO:0019843
Amo14g1003 153 SUPERFAMILY Ribosomal protein L6 64 147 IPR036789 GO:0003735|GO:0005840|GO:0006412|GO:0019843
Amo14g1003 153 PANTHER 60S RIBOSOMAL PROTEIN L9-LIKE 6 153 - -
Amo14g1003 153 SUPERFAMILY Ribosomal protein L6 7 63 IPR036789 GO:0003735|GO:0005840|GO:0006412|GO:0019843
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g1003 Amo-Chr14 14816313 14817238 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo14g1003 8 153 Cytoplasmic Ribosomal Protein Gene Family AT1G33140 67.901 1.28e-71 212
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g1003 K02940 - gmx:100306058 220.32