Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g0992 ATGCAGCTGAATTTTGACCTCAACTTCATCTTACCATCAAATCATCAGGTGCTCAGTCATATAATTATAGTCGTCCTCCTGAACAAAATAATGGCATGTTTGGTAGATTTTGATCAAGGCACAACAGGTCATCATCACAAAAATGAGGATGCTTTGGGTTGTTGTTCAATTGATCTGTGCACATCCTCTATAAAGATGGATGCAGAGGATACAGATCTACGTCTTTGCTTCCGTATAATTTCTTCCTCAAAAACATATACACTACAGCCTCGTTATGATAGAGAAAATAGAAACTCAGCAACTGGTGCTTCATCAACTAGTCAATCAGAGGATGGTGACAAATATTTGATGGATGACATATATCCAAAGGAAGTCCATAGTGTCTCTAAGATTTTAAGGGGAATTCCTGGGAATGATAAATGTGCTGAGTGCAGTGGTGCTGATCCGGACTGGGCATCTTTAAACCTTGGCATATTACTCTGTATAGAATGCTCTGAAGTGCATCGAAATCTTGGAGTTCATATCTCGAAGGTGCATGCTTTAATATATAAAGGAAAACCACTTATTTTACTTCTACTTGGAAATGAGAAAAATTTTATAAACTGGGTAAAATTTGTTTTGAAGTTTACCTTTAAATTTTAA 642 0.3645 MQLNFDLNFILPSNHQVLSHIIIVVLLNKIMACLVDFDQGTTGHHHKNEDALGCCSIDLCTSSIKMDAEDTDLRLCFRIISSSKTYTLQPRYDRENRNSATGASSTSQSEDGDKYLMDDIYPKEVHSVSKILRGIPGNDKCAECSGADPDWASLNLGILLCIECSEVHRNLGVHISKVHALIYKGKPLILLLLGNEKNFINWVKFVLKFTFKF* 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g0992 213 ProSiteProfiles ARF GTPase-activating proteins domain profile. 126 213 IPR001164 GO:0005096
Amo14g0992 213 SMART arf_gap_3 126 213 IPR001164 GO:0005096
Amo14g0992 213 MobiDBLite consensus disorder prediction 91 111 - -
Amo14g0992 213 MobiDBLite consensus disorder prediction 91 114 - -
Amo14g0992 213 Pfam Putative GTPase activating protein for Arf 129 180 IPR001164 GO:0005096
Amo14g0992 213 Gene3D Arf GTPase activating protein 113 197 IPR038508 -
Amo14g0992 213 PRINTS HIV Rev interacting protein signature 138 157 IPR001164 GO:0005096
Amo14g0992 213 PRINTS HIV Rev interacting protein signature 157 174 IPR001164 GO:0005096
Amo14g0992 213 PANTHER CENTAURIN/ARF 43 186 IPR045258 GO:0005096
Amo14g0992 213 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD2 43 186 - -
Amo14g0992 213 SUPERFAMILY ArfGap/RecO-like zinc finger 128 203 IPR037278 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g0992 Amo-Chr14 14406240 14408149 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo14g0992 136 178 C2H2 Transcription Factor Family AT3G07940 62.791 5.94e-14 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g0992 K12489 - aip:107638789 406.757