Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g0984 ATGATGGCAGAAGTCGGTGACCACAATAGCAACACCACCACATGTGCTGCAGTTCTCAACTCCAACTTGGATAAGGTATTAGGTAGCCTAGATAAAGATCAAACCTCCAACATCTTCATCACATCCCGAGCTAAGAGATTCGAGCCAGTGCTGATGGAAGAGACCTCCTTTTGCTGTGAACAATTGCCAGAGGGTGAATGCATTGAGGCTCAGAAAGAAGAAGACGGTTCACTAGTTGAGTTGGATTGTCAAAATGGCTTTTCTGAAGGAAGAAAGGAGTTCGTCACACCTGCTGTCGGAATGGAGTTTGAGTCTTATGATGATGCTTACAATTATTATATCTGCTATGCCAAGGAAGTCGGATTTCGTGTAAGGGTGAAGAATTCATGGTTCAAGCGAAACAGCAGAGAAAAATATGGTGCGGTGCTTTGCTGTAGCAGTCAGGGTTTCAAAAGAATAAAGGATGTTAACCACATGAGGAAAGAAACAAGAACTGGTTGTCCTGCAATGATAAGGATGAGGTTGATGGACTCTCAGAGGTGGAGGATACTCGAGGTCACACTTGAACACAACCACATGTTAGGTTCTAAGATACACAAATCAGTTAAGAAGATGGGAACTGGAACCAAAAAGAAGTCATTGCCGAGTTCAAATGCTGAAGTGCACACGGTTAAGTTATACCGTGCACTTGTGATAGATGCAGGAGGTAATTCTAGTGCAATCTCAAATGCTAGAGAAGACAGAACTTTGTCGGAATTTTCTAATAGATTTGTGCACAAACAGACTCCTTTAAAGGAGTTTCTTGATAAGTATGAACTAGCTCTCCACAAGAAGCACAAGGAAGAGGCTCTTGCAGACATAGAATCAAGAAGCTCAACCCCCTTGCTGAAAACTAGATGTTCTTTTGAATTGCAGCTCTCTAGAATGTACACTAGGCAAATGTTCTTGAAGTTCCAATTTGAGGTGGAAGAAATGTACTCTTGTTTCGGAACAACACAGTTACACGTGGATGGTCCGGTCATAATTTTCTTGGTCAAGGAGCGTGTCTTGTGTGAAGGAAATCGGCGTGAGATTAGGGACTTTGAAGTTCTGTACAGTAGGACAGCAGGCGAAGTTCGCTGCATCTGTAGTTGCTTTAATTTTTATGGATATTTATGCCGGCACGCATTGTGTGTGCTAAATTTCAATGGGGTGGAGGAGATACCTTCCAGATACATTCTTTCAAGGTGGAAGAAAGATTACAAGCGCCTTCATATTCCTGATCATAACACTGGTGTTCCTGATGATATTGACCATTCTCAATGGTCTAATCAGTTATTTAGAAGTGCCTTGCAAGTTGTTGAGGAAGGGACAGTTTCTGTGGACCATTACAATGTAGCTTTGCATGCTATTGAAGAATCACTAAATAAGATAGATGATGGATCTCCAAACAGTGATCAGCTGCTTGAGGTTGCGGATGAGCAAAACATTCTTGTGAATGGCTGCGATCAGTTATTTGAGATTGATGGAAGTGAACATGAGAATGGGAGGGATGAAACAACAGTGGTTGATGGTTATGCTGGAGAATCTCAAGGGAAAGGCTACCCTCCGCCGGTTGTGGGTATGGAGTTTGATACTTATGATGATGCTTACAACTATTATAATAGCTATGCTAAGGAGATTGGATTTGCTATTCGGGTTAAGTCGTCATGGACCAGACGTAACAGCAAAGAGAAGCGCGGTGCTGTGTTGTGCTGCAACTGTGAGGGCTTTAAAACACTTAAGGAAGCAAATAGCCACAGGAAAGAAACAAGAACAGGTTGTCTGGCGATGATTAGGTTGCGATCAGTGGAATCTAACAGATGGAGGGTGGATGAAGTCAAGCTTGAGCACAACCATTCATTTGATCCTGAGAGAGCACAAAACTCGAAATCACATAAGAGGACAGACGGTGGGTCGAAAAGAAAACTCGAGCCAACTCTAGATGTTGAAGTACGAACAATCAAGCTATATCGAATGCCTGTTGGGGATGCATCGGGTTATGGAAGTCCAAATTCTAATGAAGGAGGAACTAGCACCAACCTTAATTTTTCTAGGCATTTGAAACTTAGGAAAGTTATGGAGCAAAAGAGAAAAACTGAAGCTATTGATGATTTCAAGTCGCGAGATTCTAGTCCTTCACTGAGAACAAGGTACTACTATGAGTTGCAACTGTCCAAATTGTACACAAATGCAATGTTCAGGAAGGTCCAGGAGGAGATTGTGATGATGTCCTCTTGTTTTGGCATCACAGAAAGTCAAACAAATGGATCTTCAGTGACATACATGGTTAAGGTACGCCAAGGCGAGGAACTTGTCCAAGATGCAGGGCATGTGGAAGTCACATATGATAAAACCGGAGCAGAAGTGCGCTGCAGTTGTTGTTGCTTTAACTTCAAAGGCTATTTGTGCAGACATGCCTTGTCTATCCTCGATTATAATGGCGTGGAGGAAATTCCTTGTCAATATGTTTTGCCGAGATGGAGGAAGGATTTTAAACGATTGTATGTACCTCACCTTACCTCTTATAATGTTGATATCACCAACCCAGTTCAGTGTTTTGATCATTTGTACAAACGGGCGATGCAAGTTGTTGAAGAAGGGATGATATCCCAAGCTCATTATATGGTTTCTTGGCAGGCTTTTAAAGAGTCTTTGAATAAGATTCGCCTTGTATCAGATAAAATTGAGTAA 2712 0.4204 MMAEVGDHNSNTTTCAAVLNSNLDKVLGSLDKDQTSNIFITSRAKRFEPVLMEETSFCCEQLPEGECIEAQKEEDGSLVELDCQNGFSEGRKEFVTPAVGMEFESYDDAYNYYICYAKEVGFRVRVKNSWFKRNSREKYGAVLCCSSQGFKRIKDVNHMRKETRTGCPAMIRMRLMDSQRWRILEVTLEHNHMLGSKIHKSVKKMGTGTKKKSLPSSNAEVHTVKLYRALVIDAGGNSSAISNAREDRTLSEFSNRFVHKQTPLKEFLDKYELALHKKHKEEALADIESRSSTPLLKTRCSFELQLSRMYTRQMFLKFQFEVEEMYSCFGTTQLHVDGPVIIFLVKERVLCEGNRREIRDFEVLYSRTAGEVRCICSCFNFYGYLCRHALCVLNFNGVEEIPSRYILSRWKKDYKRLHIPDHNTGVPDDIDHSQWSNQLFRSALQVVEEGTVSVDHYNVALHAIEESLNKIDDGSPNSDQLLEVADEQNILVNGCDQLFEIDGSEHENGRDETTVVDGYAGESQGKGYPPPVVGMEFDTYDDAYNYYNSYAKEIGFAIRVKSSWTRRNSKEKRGAVLCCNCEGFKTLKEANSHRKETRTGCLAMIRLRSVESNRWRVDEVKLEHNHSFDPERAQNSKSHKRTDGGSKRKLEPTLDVEVRTIKLYRMPVGDASGYGSPNSNEGGTSTNLNFSRHLKLRKVMEQKRKTEAIDDFKSRDSSPSLRTRYYYELQLSKLYTNAMFRKVQEEIVMMSSCFGITESQTNGSSVTYMVKVRQGEELVQDAGHVEVTYDKTGAEVRCSCCCFNFKGYLCRHALSILDYNGVEEIPCQYVLPRWRKDFKRLYVPHLTSYNVDITNPVQCFDHLYKRAMQVVEEGMISQAHYMVSWQAFKESLNKIRLVSDKIE* 904
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g0984 903 ProSiteProfiles Zinc finger SWIM-type profile. 361 397 IPR007527 GO:0008270
Amo14g0984 903 ProSiteProfiles Zinc finger SWIM-type profile. 783 821 IPR007527 GO:0008270
Amo14g0984 903 Pfam FAR1 DNA-binding domain 545 629 IPR004330 -
Amo14g0984 903 Pfam FAR1 DNA-binding domain 111 194 IPR004330 -
Amo14g0984 903 SMART 26again6 372 399 IPR006564 GO:0008270
Amo14g0984 903 SMART 26again6 796 823 IPR006564 GO:0008270
Amo14g0984 903 MobiDBLite consensus disorder prediction 626 651 - -
Amo14g0984 903 MobiDBLite consensus disorder prediction 673 688 - -
Amo14g0984 903 MobiDBLite consensus disorder prediction 669 688 - -
Amo14g0984 903 Pfam SWIM zinc finger 795 818 IPR007527 GO:0008270
Amo14g0984 903 Pfam SWIM zinc finger 369 393 IPR007527 GO:0008270
Amo14g0984 903 PANTHER PROTEIN FAR1-RELATED SEQUENCE 8 240 471 - -
Amo14g0984 903 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 698 900 IPR031052 GO:0006355
Amo14g0984 903 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 240 471 IPR031052 GO:0006355
Amo14g0984 903 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 487 671 IPR031052 GO:0006355
Amo14g0984 903 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 54 224 IPR031052 GO:0006355
Amo14g0984 903 PANTHER PROTEIN FAR1-RELATED SEQUENCE 8 698 900 - -
Amo14g0984 903 PANTHER PROTEIN FAR1-RELATED SEQUENCE 8 487 671 - -
Amo14g0984 903 PANTHER PROTEIN FAR1-RELATED SEQUENCE 8 54 224 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g0984 Amo-Chr14 14293026 14299314 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo14g0984 FAR1 2.8e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g0984 - K17604 gmx:100796448 757.673
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo14g0984 14 14293026 14299314 Amo14g0984 14 14293026 14299314 ECH