Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g0972 ATGGGGATGGAGGACGATATATCTCCGGCCGACGCTCACGGCAGCAAAACCCCCGGCAAGGAACAGCAGGCCGCCGGCGTCGGAATCCTGCTTCAGATCATGATGCTCGTCCTCTCCTTCGTCCTCGGCCACGTCCTCCGCCGCAAGAAGATTTACGTCATCCCCGAAGCCAGTGCCTCTCTTCTCATTGGCTTAATCGTTGGTGTTCTCGCTAACATCTCTGACACCGAAAATAGTATCAGGGCGTGGTTCAATTTTCACGAAGAGTTTTTCTTCCTCTTCTTGTTACCTCCTATCATATTTCAGTCTGGCTTCAGTCTTGCACCTAAACCTTTTTTCTCTAATTTTGGAGCAATTGTGACTTTTGCAATATTTGGCACATTTATAGCCTCAATAGTGACCGGTGTTTTAGTTTATCTTGGTGGGCTGGTCTTCCTCATGTATAGATTGCCTTTTGTCGAGTGCCTCATGTTTGGGGCTCTTATATCGGCAACTGATCCCGTTACTGTTTTATCAATATTTCAGGAGCTTGGCACAGATGTCAATCTATATGCTTTGGTTTTTGGAGAATCTGTTTTGAATGATGCAATGGCAATTTCTTTGTACAGGACGATGTCATTGGTTAAGACTCATCCATCTGGACAGAATTTATTAATGGTGGTTGTTAGATTTTTGGAGACTTTTGTTGGTTCAATGTCTGCAGGTGTTGGAGTGGGATTCATATCTGCTTTACTTTTTAAGTATGCAGGATTGGATATTGACAACCTTCAGAACTTGGAGAGTTGTCTTTTTGTTCTATTTCCATATTTCTCATACATGCTTGCAGAAGGCCTTGGTTTGTCCGGTATCGTATCAATACTGTTTACAGGAATAGTCATGAAGCACTATTCATATCCAAATTTGTCACAAAGTTCTCAAAGATTTGTCTCTGCTTTTTTCGAGTTGATATCTTCACTAGCAGAGACCTTTGTATTTATATACATGGGCTTTGATATTGCTATGGAGCAACATAGCTGGTCACATGTTGGATTTATATTCTTCTCCATTATATTCATTGGAATTGCAAGGGCGGCAAATGTCTTCTCTTGTGCTTATCTGGTCAACTTGGTCAGACCTTCTCATCGAAAGATACCTCCAAAACACCAAAAAGCACTTTGGTATAGTGGACTTCGAGGAGCAATGGCCTTTGCCCTTGCATTGCAATCAGTTCATGATCTTCCAGAGGGACACGGTCAGACCATCTTTACTGCAACAACAGCAATAGTTGTTTTGACGGTATTATTGATTGGGGGATCAACCGGTACCATGCTGGAAGCTCTAGAAGTGGTTGGTGACAGTCATGGTGATAGCCCTTTGGCCACAGTGGGCACCATCACAAACAATTATGAGGAAAACAATGGTTATGTTGCTCCTTCTTATGATGAAGAATCATCATCAGGAAGCAGATTCAAGATGAAGCTAAAAGAATTCCATAAGAGTGCTGGATCATTTACTGCAATAGATAAAAACTTTCTGACCCCATTCTTTACAAGTCAAAGTGGAGATGAAGATGATGAAGATGAGCCGTTGACTTCAACAAGACCGGAAAGACCGGGACGACCGGGACTTAACCGTCACAATCCTTATTCATCATGA 1635 0.4251 MGMEDDISPADAHGSKTPGKEQQAAGVGILLQIMMLVLSFVLGHVLRRKKIYVIPEASASLLIGLIVGVLANISDTENSIRAWFNFHEEFFFLFLLPPIIFQSGFSLAPKPFFSNFGAIVTFAIFGTFIASIVTGVLVYLGGLVFLMYRLPFVECLMFGALISATDPVTVLSIFQELGTDVNLYALVFGESVLNDAMAISLYRTMSLVKTHPSGQNLLMVVVRFLETFVGSMSAGVGVGFISALLFKYAGLDIDNLQNLESCLFVLFPYFSYMLAEGLGLSGIVSILFTGIVMKHYSYPNLSQSSQRFVSAFFELISSLAETFVFIYMGFDIAMEQHSWSHVGFIFFSIIFIGIARAANVFSCAYLVNLVRPSHRKIPPKHQKALWYSGLRGAMAFALALQSVHDLPEGHGQTIFTATTAIVVLTVLLIGGSTGTMLEALEVVGDSHGDSPLATVGTITNNYEENNGYVAPSYDEESSSGSRFKMKLKEFHKSAGSFTAIDKNFLTPFFTSQSGDEDDEDEPLTSTRPERPGRPGLNRHNPYSS* 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g0972 544 PANTHER SODIUM/HYDROGEN EXCHANGER 6 12 521 - -
Amo14g0972 544 Pfam Sodium/hydrogen exchanger family 35 438 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Amo14g0972 544 MobiDBLite consensus disorder prediction 1 20 - -
Amo14g0972 544 PANTHER SODIUM/HYDROGEN EXCHANGER 12 521 IPR018422 GO:0006812|GO:0015299|GO:0016021
Amo14g0972 544 MobiDBLite consensus disorder prediction 508 544 - -
Amo14g0972 544 PRINTS Na+/H+ exchanger signature 90 101 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Amo14g0972 544 PRINTS Na+/H+ exchanger signature 104 118 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Amo14g0972 544 PRINTS Na+/H+ exchanger signature 119 127 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Amo14g0972 544 PRINTS Na+/H+ exchanger signature 159 169 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Amo14g0972 544 TIGRFAM b_cpa1: sodium/hydrogen exchanger 3 33 446 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Amo14g0972 544 Gene3D - 152 203 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g0972 Amo-Chr14 14146850 14154989 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo14g0972 21 440 Antiporters AT3G05030 34.615 5.71e-55 192
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g0972 K14724 - gmx:100781280 871.307