Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g0899 ATGGGGAGAAGAAACGGGGGAAGGTCACTGCATGGAACCCTCCGCCGTCGGCTGGAGTCGTGCAAGTCCAGTCACTCCACTGTCGATGATATCGTTAACCACCTCCGCTCCACTTACCCCGATTACCAACGCACCAAGCACCAAGCCCTCACTCGATTAGTTCAACAAGTCCTCGAGCCACGTTCCAAACACGCGACCAAAGTCTCTGCCAAGCGCAGCGGCCACGATGGCGACGAAGAAAGTGGTCGAAGCGCGCTCCGAAAGAGACAGAAGAGAGTCGACGAAGGTGAAACTCAGGGTTCTGCATCTTCGTCCTCTGCTTCAAGCTTGAGCGCGTCTGGGAGCAGCAGCAGTGAGGATGATGATGGCAGCACAGTGTCTGTTTCGACATCGGAGGACGCAAAATACCGGGAGAAGTACGAACCTGCTGTCGATTTGATGAAGACGATGCTGCGGAAAGCGTATACTCCRACGAAGGATGATAGTGCGAGGAAGATGAAAKACGTCGTGCAAGATAAGAACGTTGAAATGGAGGTCGCCAATAGTGACAAGGCTACTAATGAGATTTGTGCTAAGAATGGAGGCGGAGGCAAAGTGAAGGCGGCGTCGAATTTGAAGGGTTCCGTTTCAAATGGCGACCATGGTGGTGGCAGCTTTGTTAAGGTGAAGGCAGGACCTAGGTTAAGTGATTTGGGTGGGATGAAGGATCTTCTGGAAACGCTGGTGCAAGAAGTGATTGTTCCATGGTATTATCCTGAGCTTCCAAGAAAGCTATGTCGTACTCCTACTACTGGAATCTTGCTGCATGGGCCACCCGGTTGTGGCAAGACCACACTGGCTCACGCCATAGCAAATGCGACCCGTGTTCCCTTCTATCCGATATCAGCTACTGAGTTGGTTTCTGGAGTATCGGGTGCATCTGAAGAGAATATCAGAGAGCTTTTCGCTAAAGCGCATCGGACTGCCCCATCAATCGTCTTCATTGATGAGATTGATTCAATTGCTTCGAAAAGAGACAATTTACAGCGAGAGATGGAGAAAAGAATTGTTACACAGTTACTTGCCTGCATGGATCAATCAAGTAGGTGTATGCAATCCGCTAATGATTCGGACAGTTCTAATGTTAATCCTAGCTATGTTCTTGTAATTGGAGCTACAAATAGGCCTGATGCTCTTGACTCGGCCTTGAGAAGGCCTGGGCGGTTTGATCGGGAGTTTGTTCTTGGCATTCCTGATGAATCGTCGAGAGAACATATCCTCTCTTTGCTCACTCGCAATCTTCCACTTCAGGGTTCATTGGATCTAAAAGACATAGCCAGGTCTACACCAGGATATGTCGGTGCTGATTTGGCAGCCTTGATTACGGGGGCGTGTAATTTGGCCATGAAGAGAATTATTTCCAAAAGGATAGGGAAACATGAGACAATTGATCTTGAAGACTGGTGGAGGTGGGGCGAACCTTGGCCTCTTGAAGATATGGATAAGCTTGTCTACACAATGTCTGATTTCCAGGAAGCTTTGAAAATTGTGCAACCTTCATTAAAAAGAGAGGGCTTCTCATCCATTCCCGATGAGAAATGGGAAGATGTTGGCGGCCTTGATTATTTAAGGAAGGAGTTTAAAAATAGAATAATAAGGCCGATAAAATATCCTGAGGTTTATCAGGCATCTAGGTTTGCAAATCAGACGGGAATTTTGCTTTTTGGGCCCCCTGGTTGTGGTAAAACTCTTATTGCCAAAGCTGTTGCCAATGAGGCAGGAGTTAATTTTATTCATATTAAGGGGCCTGAGCTCTTAAATAAATTTGTTGGAGAAAGTGAGCGAGAAGTTCGACTGCAGTTTAGTCGGGCAAGGGCATGCTCACCCTGTATATTATTTTTTGATGAGGTGGATGCTTTGGCAACCAAACGTGGTGCAGAAGGTGGATCAGGCATTGAACGAGTAGTGGATCAGTTACTAATTGAGCTAGACGGTGCGGGGAAACGCCAAAATGTTTTTGTCATTGGTGCAACAAATAGGCCTGATAGGATGGATGAGGCTCTCCTCCGTCCTGGTAGATTTGGTAAACTACTTTACGTTCCTCTGCCAAGCGCTGACCAGCGGTTTTCAATATTGAAAGCTCATTTAAGGAAGGAGCCTGTTGATCCTACTGTGGATCTGAGAGCCATAGCTGAAGCGTGTGAAAATTTTAGTGGTGCAGACCTTGCTGAATTGGTGGATGAAACAACTCGTGCTGCTCTTGATGAGAAATTCACCCCAGTTGAAGAAGCTTTGAACTCAGTTGAAGCTTCTAGTGATTATACTTGCAAGCCAAGACATTTTGATATAGCACTTAGTAATGTCTTTCCCTCTGTGTCTCCGGCGAAAAGGCGTAGGTATGAGCGCTTGGCAAAGCGTTTTAAAGCATCACGAGGATCATGA 2421 0.4688 MGRRNGGRSLHGTLRRRLESCKSSHSTVDDIVNHLRSTYPDYQRTKHQALTRLVQQVLEPRSKHATKVSAKRSGHDGDEESGRSALRKRQKRVDEGETQGSASSSSASSLSASGSSSSEDDDGSTVSVSTSEDAKYREKYEPAVDLMKTMLRKAYTPTKDDSARKMKXVVQDKNVEMEVANSDKATNEICAKNGGGGKVKAASNLKGSVSNGDHGGGSFVKVKAGPRLSDLGGMKDLLETLVQEVIVPWYYPELPRKLCRTPTTGILLHGPPGCGKTTLAHAIANATRVPFYPISATELVSGVSGASEENIRELFAKAHRTAPSIVFIDEIDSIASKRDNLQREMEKRIVTQLLACMDQSSRCMQSANDSDSSNVNPSYVLVIGATNRPDALDSALRRPGRFDREFVLGIPDESSREHILSLLTRNLPLQGSLDLKDIARSTPGYVGADLAALITGACNLAMKRIISKRIGKHETIDLEDWWRWGEPWPLEDMDKLVYTMSDFQEALKIVQPSLKREGFSSIPDEKWEDVGGLDYLRKEFKNRIIRPIKYPEVYQASRFANQTGILLFGPPGCGKTLIAKAVANEAGVNFIHIKGPELLNKFVGESEREVRLQFSRARACSPCILFFDEVDALATKRGAEGGSGIERVVDQLLIELDGAGKRQNVFVIGATNRPDRMDEALLRPGRFGKLLYVPLPSADQRFSILKAHLRKEPVDPTVDLRAIAEACENFSGADLAELVDETTRAALDEKFTPVEEALNSVEASSDYTCKPRHFDIALSNVFPSVSPAKRRRYERLAKRFKASRGS* 807
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g0899 806 SMART AAA_5 561 697 IPR003593 -
Amo14g0899 806 SMART AAA_5 262 412 IPR003593 -
Amo14g0899 806 MobiDBLite consensus disorder prediction 97 131 - -
Amo14g0899 806 ProSitePatterns AAA-protein family signature. 665 683 IPR003960 GO:0005524|GO:0016887
Amo14g0899 806 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 228 518 IPR027417 -
Amo14g0899 806 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 523 799 IPR027417 -
Amo14g0899 806 PANTHER AAA-FAMILY ATPASE 30 799 - -
Amo14g0899 806 MobiDBLite consensus disorder prediction 64 96 - -
Amo14g0899 806 Pfam Nucleolin binding domain 13 59 IPR031996 -
Amo14g0899 806 MobiDBLite consensus disorder prediction 52 133 - -
Amo14g0899 806 MobiDBLite consensus disorder prediction 1 21 - -
Amo14g0899 806 Pfam ATPase family associated with various cellular activities (AAA) 266 408 IPR003959 GO:0005524|GO:0016887
Amo14g0899 806 Pfam ATPase family associated with various cellular activities (AAA) 565 694 IPR003959 GO:0005524|GO:0016887
Amo14g0899 806 Gene3D - 696 779 - -
Amo14g0899 806 ProSitePatterns AAA-protein family signature. 380 398 IPR003960 GO:0005524|GO:0016887
Amo14g0899 806 Gene3D - 523 794 IPR027417 -
Amo14g0899 806 CDD AAA 258 409 - -
Amo14g0899 806 Gene3D - 218 409 IPR027417 -
Amo14g0899 806 PANTHER NUCLEAR VALOSIN-CONTAINING PROTEIN-LIKE 30 799 - -
Amo14g0899 806 CDD AAA 552 695 - -
Amo14g0899 806 Gene3D - 411 517 - -
Amo14g0899 806 Pfam AAA+ lid domain 718 756 IPR041569 -
Amo14g0899 806 Pfam AAA+ lid domain 433 471 IPR041569 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g0899 Amo-Chr14 12685997 12690676 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo14g0899 502 801 Calmodulin-binding Proteins AT3G56690 43.137 5.22e-68 242
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g0899 K14571 - gmx:100809594 890.182