Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g0891 ATGGACCTCTTAGCCGCCGCCACCGCCGCCGCCGCCGATGGCGACAACTTCCCGGTCCCTGACCACGTCGCCCCATTCCCCGATTCCGGCGACCTCCTCTACGCCGCCATTCCCACATCCCTCCGCAGCAACAACCCCCAAAAGCTCCGCCCAATCCGCTCCGTCGCTGCCGCTAGAGCATCCTCTTTCCACCGTAACGGCCAGCTTCCAGAACCTCCCGATACCGGTGGTTCCCCTTCGGTTGAAGAAGATCGGCTTGGTTCCGGGTCGGGTCACGATGACGGGCGCACTGTTCCGTTGTGTCAGGAATCTGGCTCATCTTTGGATGATGATGATGGTAATGACATTGAAAATTCATCTGGGAGTGGCAAACATTCAGGCATGCCAAAGCGAAAGAGGAAGATGGAGAGAAGACTCGAAGATTTCGTGGAGAATATGGTAAAGAAGGTGATGGAAAAGCAAGAGCAGATGCATAAACAGTTAGTGGACATGATTGAAAAGAAGGAGAAGGAGAGGGTGATGAGAGAAGAAGCTTGGAAGCAGCAAGAGATTGAGAGAATAAGGAAGGACGAAGAGGCCAGAACCCAAGAGAGGTCACGAAACTTAGCCCTCATATCTATCATCCAAAATCTGCTTGGCCATGAGATTCAAATCCCGCAACCAGCAGAGGTAAGCAGCAAAGGAGAAGAGGACGAACCCGGACACGAAGGCGAGGAAGCGAATGCTCAAAAGAGTCTCGGCGTCAGCGGTGAGGGAAGTAACAACAGGTGGCCTGATGTTGAAGTTCAAGCGCTGATAACCTTGAGAACTTCAATGGAGCAGAAATTTCATCTTATGGGATCCAAGGTATCAATATGGGAGGAGATATCTGAAGCAATGAATAAAATGGGATACCACCGTTCTGCAAAGAAGTGCAAGGAAAAATGGGAGAACATCAACAAGTACTATAAAAGGACGATAGGGAGYGGCAAGAAGCGGCGTCAAAATAGTAAATCCTGCCCTTACTTTAATGAGTTGGATGTTCTATATAGCAATGGTCTCCTCAATCTTGGAAATCCCTTGAGCAGTAGTACCAATGATGTGTCCAAGATTGAAAAGGAGGAAATCACAAAGATGGATGATGTGAAATTTCTTTCACTTGAATGTGCTAGTGATTTTTTTATTATGTCATCTCATCTATATGAAACTTTTTAG 1194 0.4807 MDLLAAATAAAADGDNFPVPDHVAPFPDSGDLLYAAIPTSLRSNNPQKLRPIRSVAAARASSFHRNGQLPEPPDTGGSPSVEEDRLGSGSGHDDGRTVPLCQESGSSLDDDDGNDIENSSGSGKHSGMPKRKRKMERRLEDFVENMVKKVMEKQEQMHKQLVDMIEKKEKERVMREEAWKQQEIERIRKDEEARTQERSRNLALISIIQNLLGHEIQIPQPAEVSSKGEEDEPGHEGEEANAQKSLGVSGEGSNNRWPDVEVQALITLRTSMEQKFHLMGSKVSIWEEISEAMNKMGYHRSAKKCKEKWENINKYYKRTIGSGKKRRQNSKSCPYFNELDVLYSNGLLNLGNPLSSSTNDVSKIEKEEITKMDDVKFLSLECASDFFIMSSHLYETF* 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g0891 397 CDD GT1 255 319 - -
Amo14g0891 397 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 19 368 - -
Amo14g0891 397 ProSiteProfiles Myb-like domain profile. 249 313 IPR001005 -
Amo14g0891 397 SMART sant 253 315 IPR001005 -
Amo14g0891 397 Pfam Myb/SANT-like DNA-binding domain 255 341 IPR044822 -
Amo14g0891 397 PANTHER - 19 368 - -
Amo14g0891 397 MobiDBLite consensus disorder prediction 55 134 - -
Amo14g0891 397 Coils Coil 151 171 - -
Amo14g0891 397 MobiDBLite consensus disorder prediction 225 239 - -
Amo14g0891 397 Gene3D - 257 318 - -
Amo14g0891 397 MobiDBLite consensus disorder prediction 1 23 - -
Amo14g0891 397 MobiDBLite consensus disorder prediction 222 255 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g0891 Amo-Chr14 12581374 12583300 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo14g0891 130 343 Trihelix Transcription Factor Family AT5G47660 45.495 6.10e-54 182
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Amo14g0891 Myb_DNA-bind_4 2.1e-21 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g0891 - - aip:107638726 699.893