Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g0889 ATGTTCAGTGATTTGGGTGGAATGAAGGATCTTCTGGAAAAGCTGATGACAAGAGTGATTGTTCCATGGTATCATTCTGAGCTTCCAAGAAAGCTAGGTCTCACTCCTACTACTGGAATCTTGCTGCATGGGCCACCCGGTTGTGGCAAGACCACACTGGCTCACGCCATAGCTAATGAGACCAATGTTCCCTTATATCAGATATTACCAGGTGCATCTGAAGAAAACATCTCTGATGTTTTTGCTAAAGCATATAATACTCCCCGATCAATCATCTTCGTTGATGATATTGACCTAATTGATTCGAAAGGAATCAAATCACAGTTGCGGGACAGCATGGGTCATCATCACCTTCTTCTGATTGGAGCTACAAGTAGGCCGGAATCTCTTGACCCGGCTTTGAGAGGACTGCTTCGCGAAGAGTTTGTTTTAGCCGCTCCTGATGAAGCCGCGAGAAGAGACATACTGAAGTTGCTAACCTGCAAACTTAAGGGTACTTTTGATCTTGATGAGATAGCAAGATCAACGCGAGGATATGTCGGGGCTGATTTGGAAGGGGTAGTTAGGGAGGCAGGGAGATTACTGATGCGCAGAATCATCGGTGAGCGTAAAAGGGAATCTCAAAGTAATCCAGACTGGTGGAAGCAACCTATCTGGGGTGATTTGGGTAACCATGGCATCACAACATCTGATTTCCAGGATGCTGTGAAAAGAGTTCTACCTTTATTAATAAGAGAGGGCTTTTTAGCTGTTCCCGATGTAAAATGGGAAGATGTTGGGGGCCTGCATAATTTAAAGGAGGAGTTTAGAACACTTATGATAATGCCGTTAAAGTTTCCTAATATTTGTGAGACATTTGGGATTGAAAATCTGAAGGGATTTCTGCTTTTTGGGCCCCCTGGTTGTGGTAAAACTTTTATTGCCAAAGCTGTTGCCAATGAGGCTGGAGCAAATTTCATTCATATCAAGGGGCGTGAAAGCGAACGAGAAGTTCGACGAAGGTTTAGTCTTGCAAGGGCATGTACACCCTGTGTAGTACTTTTAGATGAGGTGGATGCTTTGTCAACCGAAAGCGCGGAAGTTGGATTTGGAAGCGTAATGAGCCAGCTACTTATTGAGCTAAACGATGACAAGGAGAGCCAAGGTGTTTTTGTCATTGGTACTACAAATAGGACTGATGTGATAGAGGGGACTCTGTCCTCCTGGAAGAAACTTGGCAAACGTTTTTATGTTCCTATGCCAGGCGTTGATGAGCGATTTTCAATATTGAATGCTCTTGCAAGGAAGATACCTGTTGACCCTGCTGTGAATCTGAGAGACTTGGCTATAACTTGTGAAAATTTTAGTGGTGCAGAGTAG 1359 0.44 MFSDLGGMKDLLEKLMTRVIVPWYHSELPRKLGLTPTTGILLHGPPGCGKTTLAHAIANETNVPLYQILPGASEENISDVFAKAYNTPRSIIFVDDIDLIDSKGIKSQLRDSMGHHHLLLIGATSRPESLDPALRGLLREEFVLAAPDEAARRDILKLLTCKLKGTFDLDEIARSTRGYVGADLEGVVREAGRLLMRRIIGERKRESQSNPDWWKQPIWGDLGNHGITTSDFQDAVKRVLPLLIREGFLAVPDVKWEDVGGLHNLKEEFRTLMIMPLKFPNICETFGIENLKGFLLFGPPGCGKTFIAKAVANEAGANFIHIKGRESEREVRRRFSLARACTPCVVLLDEVDALSTESAEVGFGSVMSQLLIELNDDKESQGVFVIGTTNRTDVIEGTLSSWKKLGKRFYVPMPGVDERFSILNALARKIPVDPAVNLRDLAITCENFSGAE* 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g0889 452 Gene3D - 147 246 - -
Amo14g0889 452 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 234 IPR027417 -
Amo14g0889 452 Gene3D - 252 413 IPR027417 -
Amo14g0889 452 PANTHER NUCLEAR VALOSIN-CONTAINING PROTEIN-LIKE 6 451 - -
Amo14g0889 452 Pfam ATPase family associated with various cellular activities (AAA) 295 412 IPR003959 GO:0005524|GO:0016887
Amo14g0889 452 Pfam ATPase family associated with various cellular activities (AAA) 40 141 IPR003959 GO:0005524|GO:0016887
Amo14g0889 452 SMART AAA_5 36 148 IPR003593 -
Amo14g0889 452 SMART AAA_5 290 415 IPR003593 -
Amo14g0889 452 PANTHER AAA-FAMILY ATPASE 6 451 - -
Amo14g0889 452 Gene3D - 1 143 IPR027417 -
Amo14g0889 452 Gene3D - 414 452 - -
Amo14g0889 452 CDD AAA 39 145 - -
Amo14g0889 452 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 252 451 IPR027417 -
Amo14g0889 452 CDD AAA 292 412 - -
Amo14g0889 452 Pfam AAA+ lid domain 167 200 IPR041569 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g0889 Amo-Chr14 12543757 12548537 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo14g0889 32 452 Calmodulin-binding Proteins AT3G56690 30.843 7.16e-66 226
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g0889 K14571 - sind:105166612 436.417