Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g0879 ATGAAGTCCGCTGCAACCCGAGCAGTCGGTGCTACCCAACCGGTCCTCTCGCACGATTGGAGTGTTTCCTTCACGCTTGATGTTCGCTACTGCTATCGTCCCGCGCACCTCCCTCGTACTACCGTCGAGCGTCGGTTGTTGACTAGGAGCTCCCTGTCGCCGTCGCCTGGCCGCCGGACATCCGCATGCCCATGTGGACCTGTGTCTTTATGGTGGTGCAATGGGATTGAGTTCTTGCTGTTTATGTATGGTGGGGCTCCATACCAGACTCAGGAGAGTAAGCTTATGAGAGATGTTGATATTGTTGTTGGCACTCCTGGTCGCGTGAAAGATCATATAGAGAGGAAAAATATTGACCTGATCCAGCTAAAGTTTCATGTCCTTGATGAGGCTAATGAGATGCTCAGAATGGATTTTGTAAAAAAGCTAGCAATGATACAAAAAAGGGTGCAGCCAAAGAATTCAATACCAAACAAGCAGAATAGAGAGCCACCTCATGAGAAGGTATTTGACATAACAATTGATCCAAGATGA 534 0.4831 MKSAATRAVGATQPVLSHDWSVSFTLDVRYCYRPAHLPRTTVERRLLTRSSLSPSPGRRTSACPCGPVSLWWCNGIEFLLFMYGGAPYQTQESKLMRDVDIVVGTPGRVKDHIERKNIDLIQLKFHVLDEANEMLRMDFVKKLAMIQKRVQPKNSIPNKQNREPPHEKVFDITIDPR* 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g0879 177 MobiDBLite consensus disorder prediction 160 177 - -
Amo14g0879 177 Pfam DEAD/DEAH box helicase 80 157 IPR011545 GO:0003676|GO:0005524
Amo14g0879 177 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 63 145 IPR014001 -
Amo14g0879 177 Gene3D - 63 174 IPR027417 -
Amo14g0879 177 PANTHER DEAD (ASP-GLU-ALA-ASP) BOX HELICASE 21 80 154 - -
Amo14g0879 177 MobiDBLite consensus disorder prediction 154 177 - -
Amo14g0879 177 PANTHER ATP-DEPENDENT RNA HELICASE DBP3 80 154 - -
Amo14g0879 177 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 81 151 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g0879 Amo-Chr14 12387298 12388489 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo14g0879 84 166 Eukaryotic Initiation Factors Gene Family AT3G13920 34.940 5.44e-08 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g0879 K16911 - gmx:100805921 103.605