Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Amo14g0879 | ATGAAGTCCGCTGCAACCCGAGCAGTCGGTGCTACCCAACCGGTCCTCTCGCACGATTGGAGTGTTTCCTTCACGCTTGATGTTCGCTACTGCTATCGTCCCGCGCACCTCCCTCGTACTACCGTCGAGCGTCGGTTGTTGACTAGGAGCTCCCTGTCGCCGTCGCCTGGCCGCCGGACATCCGCATGCCCATGTGGACCTGTGTCTTTATGGTGGTGCAATGGGATTGAGTTCTTGCTGTTTATGTATGGTGGGGCTCCATACCAGACTCAGGAGAGTAAGCTTATGAGAGATGTTGATATTGTTGTTGGCACTCCTGGTCGCGTGAAAGATCATATAGAGAGGAAAAATATTGACCTGATCCAGCTAAAGTTTCATGTCCTTGATGAGGCTAATGAGATGCTCAGAATGGATTTTGTAAAAAAGCTAGCAATGATACAAAAAAGGGTGCAGCCAAAGAATTCAATACCAAACAAGCAGAATAGAGAGCCACCTCATGAGAAGGTATTTGACATAACAATTGATCCAAGATGA | 534 | 0.4831 | MKSAATRAVGATQPVLSHDWSVSFTLDVRYCYRPAHLPRTTVERRLLTRSSLSPSPGRRTSACPCGPVSLWWCNGIEFLLFMYGGAPYQTQESKLMRDVDIVVGTPGRVKDHIERKNIDLIQLKFHVLDEANEMLRMDFVKKLAMIQKRVQPKNSIPNKQNREPPHEKVFDITIDPR* | 178 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Amo14g0879 | 177 | MobiDBLite | consensus disorder prediction | 160 | 177 | - | - | |
Amo14g0879 | 177 | Pfam | DEAD/DEAH box helicase | 80 | 157 | IPR011545 | GO:0003676|GO:0005524 | |
Amo14g0879 | 177 | ProSiteProfiles | Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. | 63 | 145 | IPR014001 | - | |
Amo14g0879 | 177 | Gene3D | - | 63 | 174 | IPR027417 | - | |
Amo14g0879 | 177 | PANTHER | DEAD (ASP-GLU-ALA-ASP) BOX HELICASE 21 | 80 | 154 | - | - | |
Amo14g0879 | 177 | MobiDBLite | consensus disorder prediction | 154 | 177 | - | - | |
Amo14g0879 | 177 | PANTHER | ATP-DEPENDENT RNA HELICASE DBP3 | 80 | 154 | - | - | |
Amo14g0879 | 177 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 81 | 151 | IPR027417 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Amo14g0879 | Amo-Chr14 | 12387298 | 12388489 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Amo14g0879 | 84 | 166 | Eukaryotic Initiation Factors Gene Family | AT3G13920 | 34.940 | 5.44e-08 | 49.7 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Amo14g0879 | K16911 | - | gmx:100805921 | 103.605 |