Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g0872 ATGCCAAAGCGAAAGAGGAAGATGGAGAGAAGACTCGAAGATTTCGTGGAGAATATGGTAAAGAAGGTGATGGAAAAGCAAGAGCAGATGCATAAACAGTTAGTGGACATGATTGAAAAGAAGGAGAAGGAGAGGGTGATGAGAGAAGAAGCTTGGAAGCAGCAAGAGATTGAGAGAATAAGGAAGGACGAAGAGGCCAGAACCCAAGAGAGGTCACGAAACTTAGCCCTCATATCTATCATCCAAAATCTGCTTGGCCATGAGATTCAAATCCCGCAACCAGCAGAGGTAAGCAGCAAAGGAGAAGAGGACGAACCCGGACACGAAGGCGAGGAAGCGAATGCTCAAAAGAGTCTCGGCGTCAGCGGTGAGGGAAGTAACAACAGGTGGCCTGATGTTGAAGTTCAAGCGCTGATAACCTTGAGAACTTCAATGGAGCAGAAATTTCATCTTATGGGATCCAAGGTATCAATATGGGAGGAGATATCTGAAGCAATGAATAAAATGGGATACCACCGTTCTGCAAAGAAGTGCAAGGAAAAATGGGAGAACATCAACAAGTACTATAAAAGGACGATAGGGAGCGGCAAGAAGCGGCGTCAAAATAGTAAATCCTGCCCTTACTTTAATGAGTTGGATGTTCTATATAGCAATGGTCTCCTCAATCTTGGAAATCCCTTGAGCAGTAGTACCAATGATGTGTCCAAGATTGAAAAGGAGGAAAGTGAAATTTGA 735 0.4422 MPKRKRKMERRLEDFVENMVKKVMEKQEQMHKQLVDMIEKKEKERVMREEAWKQQEIERIRKDEEARTQERSRNLALISIIQNLLGHEIQIPQPAEVSSKGEEDEPGHEGEEANAQKSLGVSGEGSNNRWPDVEVQALITLRTSMEQKFHLMGSKVSIWEEISEAMNKMGYHRSAKKCKEKWENINKYYKRTIGSGKKRRQNSKSCPYFNELDVLYSNGLLNLGNPLSSSTNDVSKIEKEESEI* 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g0872 244 Gene3D - 130 191 - -
Amo14g0872 244 ProSiteProfiles Myb-like domain profile. 122 186 IPR001005 -
Amo14g0872 244 SMART sant 126 188 IPR001005 -
Amo14g0872 244 CDD GT1 128 192 - -
Amo14g0872 244 PANTHER - 3 242 - -
Amo14g0872 244 Pfam Myb/SANT-like DNA-binding domain 128 214 IPR044822 -
Amo14g0872 244 MobiDBLite consensus disorder prediction 98 112 - -
Amo14g0872 244 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 3 242 - -
Amo14g0872 244 Coils Coil 24 44 - -
Amo14g0872 244 MobiDBLite consensus disorder prediction 95 128 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g0872 Amo-Chr14 12194244 12195476 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo14g0872 3 216 Trihelix Transcription Factor Family AT5G47660 45.495 3.61e-54 177
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Amo14g0872 Myb_DNA-bind_4 8.5e-22 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g0872 - - aip:107638726 466.848