Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g0871 ATGCTGAGATCGCTGCCAAAGCTCTCACCATTGTTATGCTCAGCCAGAACCACCAACATTCCTCGTTTCCTTGCGAATTCTCTCCGTTTCGTCTCTTCAGCCCAGACAATAACAAGAACTAAAACTTCAACAGGCAGGATTGCAATGACGACCCGTGCTCCAATTCGACCTATGTCTTCATCTACAGTTTCATCAATAACTGCTGAAGATCATGTTCAACAGCCTAAGTTACTTAAATCAACTGATGATGATCATGATGGTGTTATCGTGGAAATGGATCAACCTATGGATGCTGCAACATTTGTACTGATTCTCAGATCCTCAATCTCTCACTGGAAGCAATTGGGCAAGAAGGGTGTATGGATAAAATTGCCGATTCATTTAGCCAGTCTTGTTGAACCTCTAGTTAAGGAAGGTTTCTGGTACCACCATGCAGAGCCAAAATATTTAATGCTTGTATATTGGATTCCTGAAACTGCAAATACCATTCCTGTCAATGCCACACATAGGGTGGGCATTGGTGCATTTGTCATGAATGAAAAACGAGAGGTCCTAGTTGTTCAAGAAAACAGTGGACATTTTCGTGGATCTGGAGTCTGGAAATTCCCTACTGGAGTTGTTGATCAGGAAGAAGATATTTGTGTAGCAGCAGTAAGAGAGGTGAAAGAAGAAACAGGAGTTGACTCCGAATTCGTTGAAGTATTAGCATTCAGACAAAGTCATAAATCATTCTTTGACAAGTCAGATCTATTCTTTGTGTGCATGATGCGGCCCCTTTCTTCCGACATCCAGAAGCAGAGATTAGAGATAGAGGCATCACGGTGGATGCCATTTGAGGAGTACTCAGCTCAGCCATTTGTCCAAAAGCACGATCTTTTGAAGTACATAAGCGATGTATGCTCGGCAAAGATTGACGGGCGATATTCTGGATATAGTGCTGTATCTACTTCATCAAGCTTCTCTGATCAGAAATATTATTTGTATTTGAATGCTGGGGCCTTAAAGAGTTCTTTGTAA 1017 0.4179 MLRSLPKLSPLLCSARTTNIPRFLANSLRFVSSAQTITRTKTSTGRIAMTTRAPIRPMSSSTVSSITAEDHVQQPKLLKSTDDDHDGVIVEMDQPMDAATFVLILRSSISHWKQLGKKGVWIKLPIHLASLVEPLVKEGFWYHHAEPKYLMLVYWIPETANTIPVNATHRVGIGAFVMNEKREVLVVQENSGHFRGSGVWKFPTGVVDQEEDICVAAVREVKEETGVDSEFVEVLAFRQSHKSFFDKSDLFFVCMMRPLSSDIQKQRLEIEASRWMPFEEYSAQPFVQKHDLLKYISDVCSAKIDGRYSGYSAVSTSSSFSDQKYYLYLNAGALKSSL* 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g0871 338 ProSitePatterns Nudix box signature. 205 226 IPR020084 GO:0016787
Amo14g0871 338 CDD Nudix_Hydrolase_12 169 300 - -
Amo14g0871 338 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 170 304 - -
Amo14g0871 338 ProSiteProfiles Nudix hydrolase domain profile. 168 300 IPR000086 -
Amo14g0871 338 PANTHER NUDIX HYDROLASE RELATED 32 336 IPR003293 -
Amo14g0871 338 Pfam Nudix hydrolase domain 78 156 IPR040618 -
Amo14g0871 338 SUPERFAMILY Nudix 136 293 IPR015797 -
Amo14g0871 338 PRINTS Anti-sense to fibroblast growth factor protein GFG signature 166 184 IPR003293 -
Amo14g0871 338 PRINTS Anti-sense to fibroblast growth factor protein GFG signature 128 146 IPR003293 -
Amo14g0871 338 PRINTS Anti-sense to fibroblast growth factor protein GFG signature 254 278 IPR003293 -
Amo14g0871 338 Gene3D - 75 160 - -
Amo14g0871 338 PANTHER NUDIX HYDROLASE 2 32 336 - -
Amo14g0871 338 Pfam NUDIX domain 169 288 IPR000086 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g0871 Amo-Chr14 12188946 12192241 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g0871 - - gmx:100819062 481.485
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo14g0871 14 12188946 12192241 Amo14g0871 14 12188946 12192241 ECH
Amo01g3625 01 109131124 109134195 Amo14g0871 14 12188946 12192241 PCT