Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g0822 ATGGTTTCGCTGGAGGAATCTGGCTCCAACAACACTAACCGTTTTCCGTTGGAGAGGAGCTACCACTCCGTGTCGGCGATTTCTCCCAAAACGCACCGTCGTATAGGGAGGTCTATGCGAACCATACGCTCCAACTTTTTTCAAGACGATAACAGCAGCAACAGTTGCTACTCTTTTACTGAGAAATCCACGTGCTTATCGGAGAACCTCTCCGACTCCGTCGTCGACCTCCGCCTCGGCGAGCTCGCCTCCAGGAACGTCATCAAGCCTACTTCACCCGTCCCCGATGAGGAACTTCTTGACCTCTCGCATGCCTTCAGTGACTTCTCCGCCTGCAGCAGTGACATCTCCGGTGAGCTCCAGCGCCTCGCATGCTTACCGTCGCCGGAATACGTCCAGAAGAGCAACGACGCTGGCAACGGAGGTAACCAGGAACAGGAGACGGAGCCAGAGCCTTGCGTAGGGTTTTTGCAGAGGGAGAATTTCTCCACGGAGATCATCGAGAGCATCTCGCCGGAGGATCTTCAGCCAACAGTGAAGCTCTGCATCGACGGCCTCCAGTCGCCGTCGATCGCCGTGAAGCGATCGGCAGCCGCCAAGCTCCGTCTCTTAGCGAAGAACCGCGCCGATAACAGAGTCCTAATCGCCGAGTCAGGCGCAGTTCCTGTTCTGGTTCCGCTGCTTCGGTGCAGCGATCCGATGACGCAGGAGCACGCGGTGACGGCGCTGCTGAACCTCTCACTCCACGAGGACAACAAGACGCCGATAACCAATGCCGGCGCCGTGAAGTCGCTGATCTACGTGCTCAAGACAGGAACAGAAACCTCGAAGCAGAACGCAGCGTGTGCGCTTCTCAGCTTAGCGCTTGTGGAGGAGAACAAGAGCTCGATCGGCGCATCCGGCGCGATTCCGCCACTGGTGTCGCTGCTGATGAACGGCTCCAGCCGCGGGAAGAAGGACGCGCTGACGACGCTGTACAAGCTGTGCTCGGTGAAGCAGAACAAGGAGCGGGCAGTGAGCGCCGGCGCGGTGAGGCCTCTGGTAGAGCTTGTGGCGGAACAGGGGTCTGGCATGGCGGAGAAGGCTATGGTAGTGCTGAACAGCCTAGCAGCTATTCAAGAAGGAAAAGACGCAATCGTGGAGGAAGGTGGAATCGCTGCTCTGGTTGAAGCGATCGAAGATGGTTCGATGAAGGGAAAGGAGTTCGCCGTATTAACGCTTCTTCAGCTGTGTAGTGAGAGTGCTATCAACCGAGCGTTTCTTGTGAGGGAAGGCGCCATTCCTCCTCTCGTTGCTCTTTCCCAGTCCGGTACTGCTCGAGCTAAGCACAAGGCTGAAACACTCCTTCGATATTTGAGAGAATCAAGACAAGAAGCATCGTCTTCAAGTTCTTAA 1395 0.5649 MVSLEESGSNNTNRFPLERSYHSVSAISPKTHRRIGRSMRTIRSNFFQDDNSSNSCYSFTEKSTCLSENLSDSVVDLRLGELASRNVIKPTSPVPDEELLDLSHAFSDFSACSSDISGELQRLACLPSPEYVQKSNDAGNGGNQEQETEPEPCVGFLQRENFSTEIIESISPEDLQPTVKLCIDGLQSPSIAVKRSAAAKLRLLAKNRADNRVLIAESGAVPVLVPLLRCSDPMTQEHAVTALLNLSLHEDNKTPITNAGAVKSLIYVLKTGTETSKQNAACALLSLALVEENKSSIGASGAIPPLVSLLMNGSSRGKKDALTTLYKLCSVKQNKERAVSAGAVRPLVELVAEQGSGMAEKAMVVLNSLAAIQEGKDAIVEEGGIAALVEAIEDGSMKGKEFAVLTLLQLCSESAINRAFLVREGAIPPLVALSQSGTARAKHKAETLLRYLRESRQEASSSSS* 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g0822 464 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 342 384 IPR000225 GO:0005515
Amo14g0822 464 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 301 343 IPR000225 GO:0005515
Amo14g0822 464 SUPERFAMILY ARM repeat 176 453 IPR016024 -
Amo14g0822 464 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 4-LIKE 9 461 - -
Amo14g0822 464 Gene3D - 160 321 IPR011989 -
Amo14g0822 464 PANTHER U BOX DOMAIN-CONTAINING 9 461 - -
Amo14g0822 464 Pfam Armadillo/beta-catenin-like repeat 210 247 IPR000225 GO:0005515
Amo14g0822 464 Pfam Armadillo/beta-catenin-like repeat 292 330 IPR000225 GO:0005515
Amo14g0822 464 SMART arm_5 249 289 IPR000225 GO:0005515
Amo14g0822 464 SMART arm_5 208 248 IPR000225 GO:0005515
Amo14g0822 464 SMART arm_5 290 330 IPR000225 GO:0005515
Amo14g0822 464 SMART arm_5 331 371 IPR000225 GO:0005515
Amo14g0822 464 SMART arm_5 372 412 IPR000225 GO:0005515
Amo14g0822 464 SMART arm_5 414 454 IPR000225 GO:0005515
Amo14g0822 464 Gene3D - 322 463 IPR011989 -
Amo14g0822 464 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 219 261 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g0822 Amo-Chr14 11387699 11389961 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo14g0822 156 457 U-box Gene Family AT2G23140 48.710 3.46e-85 272
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g0822 - - gmx:100806768 713.761