Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g0807 ATGGTTAGGCGATATGATTTGTTGGAGATGATTGCATCGCCAAAAGAATGTTGGAAGATTCATGTCAGAGTAATCAGACTTTGGTCTTTACCGAGATTCAAAGACCCCAAATCCATTAGCTCCATTGAAATGGTGTTGATGGATGAGCAGGGAACAACTATGTATACTTCTGTAGGTAAGGATCTGATATCTGTGTTCGAATCATTGATATCGGAAGGAGCTGTGTATGTTTTTACATACTTTGGAGTTAGCAACAACTGTGGGTTGTACCACACAACATCGCATCATTTTCGATTATTTTTTCAAAAAAGAACTACTATCTTACCCTCTTTTTGTGATGCAATACCGTTATATGGTATTAAGTTGGTCCCTTTTAGAAAAATTATGGGATACTCTCCTCAACATCCTTTTTTGGTTGACGTTGCTGGAGTTATGACCGGTGTAGAAGGTGAGAGGAAATATGTGAAGGATGGCAAACTTATTGACATGTTGGTCATTCATATTGAGAATGACGGTTTAAAGCTTAATATTACTGTTCTTGGAGAGATGGTGGACCGGATCAAAGGTCTTGTGGCAGCGGGTACCAATATTTTACAGAACATTATGTATGGTACCAGGCTCTTGATAAATCCAGATGTTCCTGAGGCTGTGATGCTTCGAAAAAGCGTGTACTATAGAGAGATCTCGCAGTACCTGTCTGTACTTTCTGGCAAACTGGTGTATGTTAATGAAGATGAAGTTTTATATTCCACTGAGAGGAAGACAATAAAGGAGTTACAGGCGACTGCGGATGTTGGATTCTATGTTGTTCTGGCCACTGTTCTTAATGTTGAACCCGTTCTAAGTTGGTGGTATAAATCGTGTGTTTGCAGCGTGAAGGCAGAAGCTAATACGGATACATACTTCTGCTATGACTGTAATAAGGACGTGTATAATGTGGTTGATAGCAATATCTAG 957 0.395 MVRRYDLLEMIASPKECWKIHVRVIRLWSLPRFKDPKSISSIEMVLMDEQGTTMYTSVGKDLISVFESLISEGAVYVFTYFGVSNNCGLYHTTSHHFRLFFQKRTTILPSFCDAIPLYGIKLVPFRKIMGYSPQHPFLVDVAGVMTGVEGERKYVKDGKLIDMLVIHIENDGLKLNITVLGEMVDRIKGLVAAGTNILQNIMYGTRLLINPDVPEAVMLRKSVYYREISQYLSVLSGKLVYVNEDEVLYSTERKTIKELQATADVGFYVVLATVLNVEPVLSWWYKSCVCSVKAEANTDTYFCYDCNKDVYNVVDSNI* 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g0807 318 Gene3D - 5 109 IPR012340 -
Amo14g0807 318 SUPERFAMILY Nucleic acid-binding proteins 121 224 IPR012340 -
Amo14g0807 318 SUPERFAMILY Nucleic acid-binding proteins 8 109 IPR012340 -
Amo14g0807 318 Gene3D - 114 231 IPR012340 -
Amo14g0807 318 PANTHER ANIMAL RPA1 DOMAIN PROTEIN 20 290 - -
Amo14g0807 318 CDD RPA1_DBD_A_like 19 107 - -
Amo14g0807 318 Gene3D - 244 316 IPR012340 -
Amo14g0807 318 PANTHER REPLICATION FACTOR A 1, RFA1 20 290 IPR004591 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Amo14g0807 318 Pfam Domain of unknown function DUF223 43 128 IPR003871 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g0807 Amo-Chr14 11119086 11122487 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo14g0807 1 308 Core DNA Replication Machinery Family AT5G08020 22.767 7.42e-08 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g0807 - - ahf:112765919 516.924