Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g0776 ATGTCTCAAACCTTTGATTACCTGACTGATTTAAATGCAAGAAAACTACAATGGAATTTCAAAGGCACTAGGTTGCAAGTTTCAATCCCTAAATCCTTGGTGAGCAAGTGGCGGGGTGTCTTGGTTCAGTTTCAAATGTATATTATGACCAACTTCGTTGTTGTTGACAACCAAAAGGGTAACATATCAAGAGGGAATCATGTCGAGAATCCCAGTTTTCTGCTAAATGCTTTCCGATTCAAAACCATCCGTGAGTTACTATATGCTGAGAGGATCGATGACTCTGCATTGTTTGACATGATTGGTGAAGTAGTTGGTAAAGAAGATCCAAAAGAGTTTATCACCAGCAAAGGAAAGGAGACTAAACGACTGGCTATTATCTTGAAGGGCCTCAAAAACAATAGGATTGGGTGCACTATATTTGGTGAAATGGTTGACCAGCTACTTCAACACATGCAAGATGGAAGGGTTGAGCCACTAATAGTTGTGGTCCAGTATTTTAAGGCAACGAGATGGAATGGCAAGACATCTATCCAAAGCCATTTTGACATGTCACAGCTGCACATAGACCCGACCTTAAAGATGTTGCTGAATTTAGGAGTAGCTTGGTCAGGGGCTGAAGAGCTCAAACAAGGTGCTGTGTCAGTGAAAATAGTTGAAGAAGTTCTTATCCAATATGAGGAAGGTCCAGCTTGGATTGCTGCAACCATTGTTGCGATTAATGTTACAAAGGATGATTGGTTCTATAAATCATGTAGAAAATGTCCAAAGAAAGTAGAAATTCCTATTGAAAACAGATATGAATGTGGGAAGTGTGGCCATACACATGGATCTACAGCCCTAAGGTTCAAAGTCGAGGTGATGGTTTTTGACAGAACCAGTAGCATCTGCTTGCTACTGTGGGACAAGGAAACAAGTATGCTTTGTGGGAAGAGAGCTGAACAGATTATGGAAGACCATGTTATAATGGGAGATGAATATCCCAAAACACTTGATAACATGATGGACAAAAGAGTCCTTTTCAAGATAAATATCAAAGAAGCCAACATTAATCAGTTTGATCATGTGTACATAGTTATGAAAATTTGTGATGATGAGGATATCATTGACAAAAATCTTCCCAAAGAGTTGTTTACTAATCTTCCGAGTAATGTCAGTGAAAATGGCTGCAACAACTATTTGGAAATTTCAGGAAATGTGGCTAATCTTAAAACTGATTGTGATATTGAGTCTTCTATGGATGTCGTGGAGGAGTGCATCTCATCCCTCAAGTACCAAACACCATCTAAAAGAATTACCAATGTATTGAAGAATTCTTCCCCAAGTCTGGATGAACATGAGGAAGAAGGCCAGCTGTCAACCAACAGGTTTAGCAGGCAGATGGGAAATAGACAGAAATGTGTTAACCTTGATGCAGATATATGA 1425 0.3937 MSQTFDYLTDLNARKLQWNFKGTRLQVSIPKSLVSKWRGVLVQFQMYIMTNFVVVDNQKGNISRGNHVENPSFLLNAFRFKTIRELLYAERIDDSALFDMIGEVVGKEDPKEFITSKGKETKRLAIILKGLKNNRIGCTIFGEMVDQLLQHMQDGRVEPLIVVVQYFKATRWNGKTSIQSHFDMSQLHIDPTLKMLLNLGVAWSGAEELKQGAVSVKIVEEVLIQYEEGPAWIAATIVAINVTKDDWFYKSCRKCPKKVEIPIENRYECGKCGHTHGSTALRFKVEVMVFDRTSSICLLLWDKETSMLCGKRAEQIMEDHVIMGDEYPKTLDNMMDKRVLFKINIKEANINQFDHVYIVMKICDDEDIIDKNLPKELFTNLPSNVSENGCNNYLEISGNVANLKTDCDIESSMDVVEECISSLKYQTPSKRITNVLKNSSPSLDEHEEEGQLSTNRFSRQMGNRQKCVNLDADI* 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g0776 474 SUPERFAMILY Nucleic acid-binding proteins 230 363 IPR012340 -
Amo14g0776 474 Gene3D - 209 371 IPR012340 -
Amo14g0776 474 SUPERFAMILY Nucleic acid-binding proteins 79 195 IPR012340 -
Amo14g0776 474 PANTHER REPLICATION FACTOR A 1, RFA1 87 423 IPR004591 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Amo14g0776 474 Pfam Replication factor-A C terminal domain 235 355 IPR013955 -
Amo14g0776 474 PANTHER BNAC07G49340D PROTEIN 87 423 - -
Amo14g0776 474 Gene3D - 75 208 IPR012340 -
Amo14g0776 474 CDD RPA1_DBD_C 228 351 IPR013955 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g0776 Amo-Chr14 10696606 10699078 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo14g0776 69 316 Core DNA Replication Machinery Family AT4G19130 24.453 2.35e-11 64.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g0776 - - aip:107635940 793.497