Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g0703 ATGAGTCAACTCGGCGATATTCTTCAGACGGAGCCAAGGACGATTCTCGGATTGTTGACGGAGCAAATGGACGCCGCCGCCGATGGACCGCCGCGCACCAGGACCAGGCGCACCTTCAAGGACCGTTTAGGATTCATCGGCATCGGCTGTTGCGGTGCCACGTGGCGATTCCGTTCTGAGTCCATAACGGTCAGGCACGAAGACCAAGAACAACAGCAACAACCACAGCAACAGCGTCAACAGCACCAACCGCTTCTTCTTGAATCGAATCAGGCTCGAGATCCGAACCGTTTTGGACCTGACTGCGTGTCTCCGACTCCTGCCAGTTCCGGTATGAATCTTGCGGCGGCGTTAGCGGCTGAGCGGCAGCTCCGGGGGCCGCCGCAGGAGGCGGAGGGAGGTGAGAGAAGAGGTGTGCCGTGGAGGGTGTCGCTGATGAGGCTGCTGGAGGAGACCGACGGCGGCGATGCAGAGGTTAGTTCGGCGGCGAAGACATCGGATGAAGATAAGATAAGTGGAAGTGGTGGTGGTGGTGTGGGAAATGATTGGGTGTGCTGCGTGTGCATGGGGAGGAAGAAAGGCGCGGCGTTCATACCATGTGGTCACACTTTTTGCAGGGTTTGTTCAAGGGAGCTGTGGCTCAACCGAGGCTCTTGTCCCCTTTGCAATCGTTCCATTCTCGAGATTCTCGACATTTTCTGA 702 0.5741 MSQLGDILQTEPRTILGLLTEQMDAAADGPPRTRTRRTFKDRLGFIGIGCCGATWRFRSESITVRHEDQEQQQQPQQQRQQHQPLLLESNQARDPNRFGPDCVSPTPASSGMNLAAALAAERQLRGPPQEAEGGERRGVPWRVSLMRLLEETDGGDAEVSSAAKTSDEDKISGSGGGGVGNDWVCCVCMGRKKGAAFIPCGHTFCRVCSRELWLNRGSCPLCNRSILEILDIF* 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g0703 233 SUPERFAMILY RING/U-box 181 230 - -
Amo14g0703 233 PANTHER OS01G0917900 PROTEIN 13 233 - -
Amo14g0703 233 MobiDBLite consensus disorder prediction 68 83 - -
Amo14g0703 233 SMART ring_2 185 222 IPR001841 -
Amo14g0703 233 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 179 232 IPR013083 -
Amo14g0703 233 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 13 233 - -
Amo14g0703 233 ProSiteProfiles Zinc finger RING-type profile. 185 223 IPR001841 -
Amo14g0703 233 MobiDBLite consensus disorder prediction 90 110 - -
Amo14g0703 233 Pfam Zinc finger, C3HC4 type (RING finger) 184 227 - -
Amo14g0703 233 MobiDBLite consensus disorder prediction 153 174 - -
Amo14g0703 233 MobiDBLite consensus disorder prediction 64 83 - -
Amo14g0703 233 CDD RING-HC 185 222 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g0703 Amo-Chr14 9536147 9537644 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo14g0703 15 233 C3H Transcription Factor Family AT4G22250 50.446 1.03e-59 186
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g0703 - - aip:107638663 433.721