Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g0683 ATGGCACTAATGCAGCGCCTAGCTAGAACAGCACGCACCCTCCGAACCCTAACCTCTCGCCCCCTTTCCCCTCACAATCTTAGTCGTGAACGAAGTAAGCGGCACGGAGCTGTTTTGGGATCCGGACCCTCACGTGARGATWACTATCAGGCACCGTATTCGTTGCTTCCGGCTGTGTTAGCTGGRGCTTTCGGAATTGGATTGGCGGAGACGGTGTATGCTGATGCCGATCGCGGTGGCGTTGGCGGCGCTGAGGATGTGCACGCTGTTGCGAAGAAAGAACGCGAGCGCATTGAGGAGTTGCTTAGGAAGAAAGGAGTTCGTTATGGTTCTTATCCTCGCTTCACTGTTGCTGTTAAAGGACAAAAGGTCAGCGTTAAGTTTCAAATACCTCCTGCCTGTGAAGTCCCGCAACTTATTGCAAATCTCGCAACAAATCTTGGACTGAAAGCTGAAGGGAACGGAGGTGGATCGGATATGCTATTGCGATCTTGGGACAGCACAGTGGCTTGGCAGCTTGCCCTTACTCATCCGTCCAAGAAAAAGCATATTCAAGGGGATGATCCATCTTCAATAGATATGAATGGACATGATGGAGATCTTTGCATACTCTTTTTTCATTCTCTCATTGGCTCAGATAAAGCTGAAATTGAACTTATTAAGCAAGGGAACTTGAGTCCTGAAGAGCTTGATGCTTTCGTCTCTGTTTTYCAATTAGCTGGTAGCAAGATGGGACAAAGAAGTMCCCCCCTGGAAAGGAAGTCAAGGGAAGAGACTGAACAGTCGCCATCTGTAGATAAATCTATTTCTAGTCTTGAGGCCATGGGAGTGAGAATTTATGGATTGAATGAACCCATTGGTATATCAAATGGTGAGGTATCATGGGACAACATTGCTGGATATGAGCATCAAAAACGAGTAATAGAAGATACAATACTGTTGGCTTTGCATAGTCCTGAAGTATATGACAATATTGCACGAGGGACTCGTCAAAAGTTTGAATCAAACCGGCCTCGAGCTGTGCTGTTTGAAGGTCCACCAGGTACAGGGAAAACTTCTTGTGCTCGCGTTATTGCCAATCAAGCAGGTGTCCCTTTGTTATATGTTCCACTTGAGGCTGTAATGTCTGAATACTACGGTAAAAGTGAACGCCTTCTGGGAAAAGTGTTTTCACTTGCAAATGAACTTCCTAATGGTGCTATTATATTTCTGGATGAGATTGATTCTTTTGCTGCTGCTCGGGATAATGAAATGCATGAAGCTACAAGGAGAATATTGTCAGTGTTGTTACGACAGATAGATGGCTTTGAGCAGGATAAGAAAGTGGTCGTGATTGCTGCTACCAATAGAAAGGAAGACCTTGATCCTGCATTAATCAGCCGYTTTGATACTATGATCCCTTTTGGCTTACCTGATCACCGTAATCGTCAGCAAATAGCATCCAAATATGCAAAGCACCTAACCAAACCTGAACTAGATGAACTTGCCAGAGCTACAGAAGATATGTCCGGAAGAGACATTCGTGATGTTTGTCAGCAAGCAGAACGATCATGGGCATCAAAGATTATTCGAGGGCAAGTATCCAAAGATGGTGAACAAGAAAGTCTTCCACCTTTGCAAGAGTATATAGAGTGCGCCACAATTCGGCAAAACTCACTGCTCAGTGCTGCTGCTGGCAGGAATTTCCGAAATTTTCCCCATCTTAGGATGGCAACCGACTGA 1722 0.4518 MALMQRLARTARTLRTLTSRPLSPHNLSRERSKRHGAVLGSGPSREDXYQAPYSLLPAVLAGAFGIGLAETVYADADRGGVGGAEDVHAVAKKERERIEELLRKKGVRYGSYPRFTVAVKGQKVSVKFQIPPACEVPQLIANLATNLGLKAEGNGGGSDMLLRSWDSTVAWQLALTHPSKKKHIQGDDPSSIDMNGHDGDLCILFFHSLIGSDKAEIELIKQGNLSPEELDAFVSVFQLAGSKMGQRSXPLERKSREETEQSPSVDKSISSLEAMGVRIYGLNEPIGISNGEVSWDNIAGYEHQKRVIEDTILLALHSPEVYDNIARGTRQKFESNRPRAVLFEGPPGTGKTSCARVIANQAGVPLLYVPLEAVMSEYYGKSERLLGKVFSLANELPNGAIIFLDEIDSFAAARDNEMHEATRRILSVLLRQIDGFEQDKKVVVIAATNRKEDLDPALISRFDTMIPFGLPDHRNRQQIASKYAKHLTKPELDELARATEDMSGRDIRDVCQQAERSWASKIIRGQVSKDGEQESLPPLQEYIECATIRQNSLLSAAAGRNFRNFPHLRMATD* 574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g0683 573 ProSitePatterns AAA-protein family signature. 442 461 IPR003960 GO:0005524|GO:0016887
Amo14g0683 573 SMART AAA_5 337 472 IPR003593 -
Amo14g0683 573 MobiDBLite consensus disorder prediction 246 267 - -
Amo14g0683 573 Coils Coil 84 104 - -
Amo14g0683 573 CDD AAA 330 470 - -
Amo14g0683 573 PANTHER P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN 24 556 - -
Amo14g0683 573 MobiDBLite consensus disorder prediction 14 45 - -
Amo14g0683 573 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 292 521 IPR027417 -
Amo14g0683 573 Gene3D - 471 532 - -
Amo14g0683 573 PANTHER 26S PROTEASOME REGULATORY SUBUNIT 24 556 - -
Amo14g0683 573 Pfam ATPase family associated with various cellular activities (AAA) 341 469 IPR003959 GO:0005524|GO:0016887
Amo14g0683 573 MobiDBLite consensus disorder prediction 249 263 - -
Amo14g0683 573 Gene3D - 292 470 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g0683 Amo-Chr14 9198199 9204583 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo14g0683 337 537 Calmodulin-binding Proteins AT3G56690 36.364 1.36e-27 116
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g0683 - - gmx:100803362 831.632