Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g0670 ATGCTGTTATATCGAAGTTTCTTTAGGAATTGGACAACTGGAGATTACAGGAAACTTAGTTCTTTTAAAATTTATGGAAAAAATAAAATGCTAAATTCAGAAGAAAAAAGGAACAAAGCGCCAAGAAGATGTGTTGTTACCTCGAACAAGAAAAGAAAAATTGAAGAATCTAAGGACGCTGGACAAACCTTGAAGATATGTCATCAGTGTTTGAAAAAGGAAAGAGCAGCATTTGTACCTTGCACTACATGTAGAAAAATGTATTGTATGCGGTGCATCCATCAATGGTATCCCAATCTGACAATAACAGATATTTCATTAAGGTGTCCCTTATGCCGTAACAACTGCAATTGCAATGTTTGCTTGCGTTCAAAGGCAATCTTTGAGACGTCTACAAGGGACATCACATGTACTGAAAAAGTTCAGCATCTGGTTTATATGATCAAATTAGTTCTTCCATTTATGAAACAAATTTGTGAAGAACAAATTCAAGAGCAAGAGATTGAAGCTAAAATACAAGGAAAATCATATTATGAGCTTAAGATACCACAATCTCCTAGCGATGACGAGCGTATCTATTGTGATCATTGTGCTACTTCAATTGTTGATCTTCACAGAAGCTGCCCCAAGTGTTCATTTGAAATTTGCCTTAATTGCTGTAAAGAAATTCGCAAAGGAAGCATTTCGGTACTGCCTGAAATGAAGTTCCAATATGTGAATAGGGGCTTTGATTATATGCATGGTGGTGACCCTTTACCAGTGTCTAGTAATTTAGAGTCTCCAAAGGGTCATCACACTAGGGTATCTACCAAATGGAATGGCAACAGTGATGGAAGGGTTAGATGTGCTCCTAAAGAAATCGGAGGTTGCGGCCACTCATCGATGGTGTTGAAGCGTGTGCTTCCAGATGGTTGGATATCTGAATTGGAAGCCAAAGCTAATGAAATCTTAAATTTCTTTTTCAAAACTGAACATGAAGAAGCTCTTCAGAAGGAAGCAATTTCATGCAGCAACTCTATGCTGAGAGCAGCTTCTAGAGATAGCCCTGAAGACAACAACCTATACTATCCAGAGTCTAATGAGATATCAAATGAAGGTTTAGGCCTCTTCAGGAAGCATTGGACTAATGGTGAACCGATTATAGTTCGCAACGTTCTTAAGCAGGGGACAGGTCTGAGTTGGGAGCCAATGGTTATCTTGAGGGCACTATCTGAAGGTTTAGGTTACAAGATCAACTCAGATATGTCAGTGAAGGCTATTGATTGCTTGGCTACTTGTGAGGTTGAAATTAAAGCTCGCATGTTCTTTAAAGGTTATATGGAGGGAAGAAGATATGTTAACCTTTGGCCAGAGATGCTGAAGCTAAAGGATTGGCCTCCCTCTAACAAGTTTGAAGATCTTTTGCCGCACCACTTTAACGAGTTTATCAGTTGCTTACCATTCCAAGAGTACACTGATCTTCGAGCTGGAGTCCTCAATCTTGCTGCAAAGTTGCCAGAACATGTCATAAAGCCTGATATGGGTCCGAAAACATATATTGCTTATGGGATTACAGAAGAACTTGGCAGAGGGGATTCTGTGACTAATCTCCACTGCGACATGTCAGACGCTGTGAATATTTTGACTCACACTGTGGAAGTGAAGTTAACTGATGAACAACATTCTGCCATCTCAAAATTGAAAAAAGCACACAAAGAACAAGATAAGAAAGAGCAAAATGATCAAGAAAGTGTTGCTGAATACAACAGAGAACTGAAAGAAAATAATGAGAAGTGCTTTATTAGGATCAATCCAAAGAATTTTCCAAATGATGTATCTGCAATCTCGGAAGAAACAAGAGAAACAGGTGCTGCTCTTTGGGATATTTTCAGAAGAGAGGACACTGAAAAATTAGGAGCATATCTAAGAAAACACTCCAAAGAATTTCGACATATTTATTGTTCGCCAGTTGAAGAGGTTGTGCATCCAATTCATGATCAATGTTTCTACTTGACTTTAGAGCACAAAAAGAAGTTGAAAGAGGAATATGGTGTAGAAGCTTGGACTTTTGAACAAAAACTTGGTGAGGCAGTGTTTATTCCTGCTGGATGCCCTCATCAAGTGAGAAATCTGAAGTCATGCACAAAAGTGGCTGCAGATTTTGTGTCACCAGAGAATGTTCACATGTGTTTGCGTCTTACGGATGAGTTTCGTAATCTTCCAAAGAATCACAAAGTCAGAGAAGAAAAACTCGAGGTAATGATCAATCATCAAGGCATTAGGCCAGACTTGATCACATACAATACGTGA 2289 0.3884 MLLYRSFFRNWTTGDYRKLSSFKIYGKNKMLNSEEKRNKAPRRCVVTSNKKRKIEESKDAGQTLKICHQCLKKERAAFVPCTTCRKMYCMRCIHQWYPNLTITDISLRCPLCRNNCNCNVCLRSKAIFETSTRDITCTEKVQHLVYMIKLVLPFMKQICEEQIQEQEIEAKIQGKSYYELKIPQSPSDDERIYCDHCATSIVDLHRSCPKCSFEICLNCCKEIRKGSISVLPEMKFQYVNRGFDYMHGGDPLPVSSNLESPKGHHTRVSTKWNGNSDGRVRCAPKEIGGCGHSSMVLKRVLPDGWISELEAKANEILNFFFKTEHEEALQKEAISCSNSMLRAASRDSPEDNNLYYPESNEISNEGLGLFRKHWTNGEPIIVRNVLKQGTGLSWEPMVILRALSEGLGYKINSDMSVKAIDCLATCEVEIKARMFFKGYMEGRRYVNLWPEMLKLKDWPPSNKFEDLLPHHFNEFISCLPFQEYTDLRAGVLNLAAKLPEHVIKPDMGPKTYIAYGITEELGRGDSVTNLHCDMSDAVNILTHTVEVKLTDEQHSAISKLKKAHKEQDKKEQNDQESVAEYNRELKENNEKCFIRINPKNFPNDVSAISEETRETGAALWDIFRREDTEKLGAYLRKHSKEFRHIYCSPVEEVVHPIHDQCFYLTLEHKKKLKEEYGVEAWTFEQKLGEAVFIPAGCPHQVRNLKSCTKVAADFVSPENVHMCLRLTDEFRNLPKNHKVREEKLEVMINHQGIRPDLITYNT* 763
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g0670 762 PANTHER LYSINE-SPECIFIC DEMETHYLASE JMJ25-LIKE 32 747 - -
Amo14g0670 762 ProSiteProfiles Zinc finger RING-type profile. 67 113 IPR001841 -
Amo14g0670 762 PANTHER JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN 32 747 IPR045109 GO:0032454|GO:0033169
Amo14g0670 762 Gene3D Cupin 352 740 - -
Amo14g0670 762 Pfam JmjC domain, hydroxylase 609 714 IPR003347 -
Amo14g0670 762 SUPERFAMILY Clavaminate synthase-like 371 744 - -
Amo14g0670 762 Coils Coil 571 591 - -
Amo14g0670 762 ProSiteProfiles JmjC domain profile. 487 731 IPR003347 -
Amo14g0670 762 SMART cupin_9 468 731 IPR003347 -
Amo14g0670 762 CDD cupin_RmlC-like 655 703 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g0670 Amo-Chr14 9024607 9030223 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Amo14g0670 JmjC 1.4e-14 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g0670 K15601 - gmx:100801772 953.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo14g0670 14 9024607 9030223 Amo14g0670 14 9024607 9030223 ECH