Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Amo14g0630 | ATGGAGTCCAAAAAAAAGGAGCAAATTCCACGTGCACACACTACCCAAAAAGTCACAGGCTGTTACTCTATTCTCATTCTCATTTCTCACCAACTCACTCACTCAGATGGTGATACATTTGCTTCCACGTTAAATATGGCTGAGACTGCACAACCTAATGCTGAGTTGTTGGAATGGCCGAAGAAAGATAAGCGCCGCTTCCTTCATGCTGTGTACCGTGTTGGTGACCTTGATCGCACCATCAAGTTTTATACTGAAGCTTTTGGAATGAYGCTCTTGAGGAAAAGGGATGTTCCCGAGGAGAAATATGCCAATGCTTTTCTTGGATTTGGCCCTGAACACTCCAACTTTGTTGTGGAATTGACATATAATTATGGGGTTACATCGTACGATATTGGAACTGGATTTGGACATTTTGCTATTGCAACTCCAGATGTTTACAAATTGGTTGAAGACATCAGGGCTAAGGGTGGAAATGTCACTAGGGAGCCTGGTCCTGTTAAGGGCGGGTCATCGGTTATTGCCTTTGTCAAGGATCCTGATGGTTACACTTTRGAGCTCATCCAAAGAGCTTCAACCCCTGAGCCACTGTGTCAAGTAATGCTTCGTGTTGGTGATTTAGAGCGCTCGATTAAGTTTTACGAAAAGGCTTTAGGTATGAAGGTGGTGAAGAAAGTTGACAGACCTGAATACAAGTACACCSTAGCTATGCTTGGATATGCAGAGGAGCACGAGACAACTGTGTTGGAGTTGACATATAACTATGGTGTCACCGAATACACCAAGGGAAATGCTTATGCACAGGTTGCTATTGGTACCGATGATGTATACAAGAGCGCTGAGGTAATCAACCATGTAACACAAGAGCTTGGAGGAAAGATTACTCGCCAACCAGGGCCAATTCCTGGCATRAACACCAAGATTGTTTCTTTCTTGGATCCAGATGGATGGAAAACTGTGTTGGTGGACAATGAAGATTTCCTGAAGGAACTGCAGTGA | 999 | 0.4374 | MESKKKEQIPRAHTTQKVTGCYSILILISHQLTHSDGDTFASTLNMAETAQPNAELLEWPKKDKRRFLHAVYRVGDLDRTIKFYTEAFGMXLLRKRDVPEEKYANAFLGFGPEHSNFVVELTYNYGVTSYDIGTGFGHFAIATPDVYKLVEDIRAKGGNVTREPGPVKGGSSVIAFVKDPDGYTLELIQRASTPEPLCQVMLRVGDLERSIKFYEKALGMKVVKKVDRPEYKYTXAMLGYAEEHETTVLELTYNYGVTEYTKGNAYAQVAIGTDDVYKSAEVINHVTQELGGKITRQPGPIPGXNTKIVSFLDPDGWKTVLVDNEDFLKELQ* | 333 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Amo14g0630 | 332 | ProSiteProfiles | Vicinal oxygen chelate (VOC) domain profile. | 196 | 324 | IPR037523 | - | |
| Amo14g0630 | 332 | SUPERFAMILY | Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase | 197 | 323 | IPR029068 | - | |
| Amo14g0630 | 332 | Pfam | Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily | 68 | 187 | IPR004360 | - | |
| Amo14g0630 | 332 | Pfam | Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily | 199 | 318 | IPR004360 | - | |
| Amo14g0630 | 332 | CDD | GlxI_Ni | 68 | 188 | - | - | |
| Amo14g0630 | 332 | PANTHER | LACTOYLGLUTATHIONE LYASE | 56 | 332 | - | - | |
| Amo14g0630 | 332 | ProSitePatterns | Glyoxalase I signature 2. | 133 | 145 | IPR018146 | GO:0004462|GO:0046872 | |
| Amo14g0630 | 332 | ProSitePatterns | Glyoxalase I signature 1. | 199 | 220 | IPR018146 | GO:0004462|GO:0046872 | |
| Amo14g0630 | 332 | ProSiteProfiles | Vicinal oxygen chelate (VOC) domain profile. | 66 | 190 | IPR037523 | - | |
| Amo14g0630 | 332 | SUPERFAMILY | Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase | 65 | 192 | IPR029068 | - | |
| Amo14g0630 | 332 | TIGRFAM | glyox_I: lactoylglutathione lyase | 197 | 327 | IPR004361 | GO:0004462|GO:0046872 | |
| Amo14g0630 | 332 | TIGRFAM | glyox_I: lactoylglutathione lyase | 54 | 199 | IPR004361 | GO:0004462|GO:0046872 | |
| Amo14g0630 | 332 | Gene3D | - | 193 | 332 | IPR029068 | - | |
| Amo14g0630 | 332 | Gene3D | - | 39 | 192 | IPR029068 | - | |
| Amo14g0630 | 332 | PANTHER | LACTOYLGLUTATHIONE LYASE-LIKE PROTEIN | 56 | 332 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Amo14g0630 | Amo-Chr14 | 8389997 | 8392947 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Amo14g0630 | 199 | 323 | Calmodulin-binding Proteins | AT1G08110 | 29.333 | 1.31e-11 | 62.0 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Amo14g0630 | 14 | 8389997 | 8392947 | Amo14g0630 | 14 | 8389997 | 8392947 | ECH | |
| Amo01g3655 | 01 | 109595141 | 109596988 | Amo14g0630 | 14 | 8389997 | 8392947 | PCT |