Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g0575 ATTCCAACACAGCAGCTTACGAACGCAACCTTAGCTTGTTTCAATGCGTATATATCATCATGTAATAAACCACTTAAGGCAAGGCACCATTCTTACATTTCTTTTTCAGTTTTTCCTCTCTCCACAGAACTGAAATCTCTAATTGTAGTTGAGAGTGATCAATCTGCAACAAGAGGGACAAGCACTCCATCACACACCAAGGTAGTAGCTGGTCCTTCTGTTCCTTCACCTCTCTTAAGAGATCATCAACATTCTCACCATTACATCCACTACCACCACCTACAACAAGAAGAAGAATTTCACCAAAAACTTCACAACTTTTGGGACAATCAGTACCGTGAAATCGAACAAGCGGCCGATTTCAGGATCCACAGCTTACCCTTGGCTAGAATCAAGAAGATCATGAAGGCTGATGAAAATGTGAAGATGATATCAGCAGAGGCTCCTATTATATTTTCCAAGGCTTGTGAAATGTTCATCATGGAATTGACAATGAGGGCTTGGAATAATGCTGAAGAGAACAAAAGGAGAACACTTCAGAAGAATGACATTGCTGCTGCAGTCACAAAAACTGATGTGTTTGATTTTCTTGTTGATGTTGTCCCTAGAGATGAAACCGTGGACCTTGGTTTATATGCTGGTATAAGAAGAGGTGGAGCCAATAATAATATTGTTCCTTGCTACTATTATGTGCCACCTCAGCATGTTATGGGTCCACCACCATATGGTCCTCCAAGAGTGCCTATGGTGGGAAGACATGTTCCTAATCAAGATAATATTGATGAGCAGCAAAATAGTGAAAATACTACTCATGCTATGTGTCCAAAGGAGCAAAATCATTCTTCAGATTCAGATGAATGA 861 0.403 IPTQQLTNATLACFNAYISSCNKPLKARHHSYISFSVFPLSTELKSLIVVESDQSATRGTSTPSHTKVVAGPSVPSPLLRDHQHSHHYIHYHHLQQEEEFHQKLHNFWDNQYREIEQAADFRIHSLPLARIKKIMKADENVKMISAEAPIIFSKACEMFIMELTMRAWNNAEENKRRTLQKNDIAAAVTKTDVFDFLVDVVPRDETVDLGLYAGIRRGGANNNIVPCYYYVPPQHVMGPPPYGPPRVPMVGRHVPNQDNIDEQQNSENTTHAMCPKEQNHSSDSDE* 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g0575 286 Pfam Core histone H2A/H2B/H3/H4 113 188 IPR007125 GO:0003677
Amo14g0575 286 Gene3D Histone, subunit A 87 203 IPR009072 GO:0046982
Amo14g0575 286 SUPERFAMILY Histone-fold 90 197 IPR009072 GO:0046982
Amo14g0575 286 MobiDBLite consensus disorder prediction 250 286 - -
Amo14g0575 286 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 72 237 - -
Amo14g0575 286 MobiDBLite consensus disorder prediction 257 277 - -
Amo14g0575 286 PANTHER NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT C-3-RELATED 72 237 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g0575 Amo-Chr14 7823647 7825283 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo14g0575 104 237 CCAAT-HAP5 Transcription Factor Family AT1G56170 64.444 5.81e-58 182
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Amo14g0575 Histone 5.5e-19 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g0575 K08066 - han:110877767 203.371
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo14g0575 14 7823647 7825283 Amo14g0575 14 7823647 7825283 ECH