Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g0562 ATGATGATGTCTTCAGTGAAGTTAACAGCGTCATCACCTTTCTCTTCTGCTTTCAGAAGCAGAAAGAATAACAAGCTTCCTAATCTCCAAACAAGGTCTCAACTTTCCACATTACCCACCATTCAAATCGCAAAACAAAACTTGGGTCACTCTCCATTCTTCACCCACAAGCCTCTCCACCTATCATCCAGCATTGTGTGCCAGGCCTATGAAGCTGACAGGTCAAGGCCATTGGAGATTGAGATTCCTGATGAAGAGGTTGCTAAGAAGCTCAAGATGGGACTCTACTTTGCTTCATGGTGGTCTCTTAATGTGGTCTTCAACATATATAACAAGAAGGTCCTCAACGTTTTTCCTTATCCATGGCTTACCTCAACTCTCTCCCTGGCTGCTGGCTCCCTCATCATGTTGATTTCGTGGGCCACAAAGGTTGCTGAACCACCTAAAGTCAACTTGGACTTCTGGAAGGCCCTTCTTCCTGTTGCGGTGGCACACACAATTGGGCATGTAGCAGCAACTGTGAGCATGTCAAAAGTTGCTGTTTCATTCACTCACATAATCAAGAGTGGAGAGCCTGCTTTCAGTGTCTTGGTGTCAAGGTTCTTGCTCGGAGAAGCATTCCCTTTGCCGGTTTACCTCTCATTGCTGCCAATCATAGGTGGTTGCGCACTCTCTGCAGTAACGGAGCTCAATTTCAATATGATTGGGTTTATGGGGGCCATGATATCAAACATGGCATTTGTGTTTAGGAATATATTCTCAAAGAAGGGGATGAAGGGCATGTCTGTTAGCGGAATGAACTACTATGCTTGCCTTTCAATCTTGTCTCTATTGATCCTAACACCTTTCGCCATTGCTGTTGAGGGCCCCAAGCTCTGGGCTGCTGGCTGGCAACAAGCTCTCTCTCAGATTGGTCCCAACTTTATATGGTGGGTAGCAGCTCAAAGTGTGTTCTACCACTTATATAATCAAGTGTCATACATGTCCCTTGATCAAATTTCACCCTTAACATTCAGCATTGGAAACACAATGAAGAGAATCTCTGTGATTGTCTCTTCCATCATTATCTTCCACACGCCAGTTCAGCCCATCAATGCACTTGGTGCTGCCATTGCAATTCTTGGCACCTTCCTCTATTCACAGGCTAAACAGTGA 1155 0.4519 MMMSSVKLTASSPFSSAFRSRKNNKLPNLQTRSQLSTLPTIQIAKQNLGHSPFFTHKPLHLSSSIVCQAYEADRSRPLEIEIPDEEVAKKLKMGLYFASWWSLNVVFNIYNKKVLNVFPYPWLTSTLSLAAGSLIMLISWATKVAEPPKVNLDFWKALLPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLLGEAFPLPVYLSLLPIIGGCALSAVTELNFNMIGFMGAMISNMAFVFRNIFSKKGMKGMSVSGMNYYACLSILSLLILTPFAIAVEGPKLWAAGWQQALSQIGPNFIWWVAAQSVFYHLYNQVSYMSLDQISPLTFSIGNTMKRISVIVSSIIIFHTPVQPINALGAAIAILGTFLYSQAKQ* 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g0562 384 TIGRFAM tpt: Tpt phosphate/phosphoenolpyruvate translocator 91 383 IPR004696 GO:0016021|GO:0022857|GO:0055085
Amo14g0562 384 PANTHER GLUCOSE-6-PHOSPHATE/PHOSPHATE TRANSLOCATOR 2, CHLOROPLASTIC 30 383 - -
Amo14g0562 384 PANTHER SOLUTE CARRIER FAMILY 35 30 383 - -
Amo14g0562 384 SUPERFAMILY Multidrug resistance efflux transporter EmrE 133 226 - -
Amo14g0562 384 Pfam Triose-phosphate Transporter family 91 380 IPR004853 -
Amo14g0562 384 SUPERFAMILY Multidrug resistance efflux transporter EmrE 284 381 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g0562 Amo-Chr14 7639743 7642244 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo14g0562 56 384 Antiporters AT1G61800 81.009 0.0 560
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g0562 K15283 - gmx:100804205 594.349