Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g0552 ATGCATGCAATGATGTTTCTTGAGCAGAAGTATCACCTAATGTTCTGTTTCTTCCTAGCTTTACTTCCATTTGCCAGTGTTGGTCAGAGCCATAAGAACATTTCATTGGGTTCTTCCCACACTGCACAAGCAGGTGATTCCACTTGGGCAGTATCACCATCTGGTAACTTTGCAGTTGGTTTCCAACAGATTGAGGAGAATGGGTTCTTGCTATCCATTTGGTTCAACCAAATACCGGAAAGGACCATTGTTTGGTCTGCCAATGGAGGAAACCTTGCACCAAAAGGTTCCAAAGTTGAGCTTACCTCAGATGGATTTTTCTTGCTGAATGATCCCACCGGCAACCGAATATGGTCTGCTGGATCCTCCGGCAGTGGAACATCCCATGCTGCCATGGTTGATACCGGCAATTTCGTGTTGGCGAGTCAAAGCACCGATGACTTCTCATTAGTCTTCAATCAATCTGGGGTTCTTTTCCTTCGGGCAAACAACGGAAGCATAATCAGCATGATATCATCAAAGACTGCTTCCACCCAAGATTTCTACCAGAGAGCAGTGCTTGAATATGATGGAGTTTTCAGGCATTATGCCTACCCGAAGAGCAGTAACTCCAATACAAGAAGCTGGAAGATGGCATGGTCAACTGTTTATTACTTACCGCCAAATATCTGCTTGGATATTAGGGAAGATTATGGCAGTGGAGCTTGTGGATTCAACAGTTATTGCACTTTTGATGATGGGAAAAAGAGTTGCCATTGTCCATCTGGATATAGCTTCATTGATCCAGCTGATGTGATGAAAGGATGCAGACCGGACTTTGATTCACAAAGTTGTGATGGATCTTCCCCAGAAACAGATCTTTTTGATTTCTATGAGATGGAAAATACAGACTGGCCTCTGACAGATTATGAATATTTTGAGCAAGCGAATGAGGACTGGTGCAGACAGGATTGCTTGAGTGATTGTTTCTGCGCTCTTGCCATTTTTAGAGATGCTGGGTGTTGGAAAAAGAAGTTACCCTTCTCCAATGGAAGGAAAGATCCCAGTTTTCAAGCAAAAGCTCTGTTAAAGATAAGAAAAGATAATTCTACCTTCAAATGTGAGGGTCCAGTTAGAAAGAAAGATCAATCTAAGCTGATTATAGTTATCTCTGTGCTTCTAAGCAGTTCAGTGTTAATGAACTTGCTCCTATTAGTGGCGGGTTTTTCAGTTGTATACTGGTGGAGATCTAAGAGTTCTAAGGCAAATCAACCTAGCCAATCCATTGTAGGCACTTGTCTTAGAAGTTTCACTTTTGAAGAGTTGAGGAAGGCAACGAATGGGTTCGAGGAGGTGCTTGGTCAAGGGGCATTTTCAACTGTCTACAAAGGAGTTTCATTTGATCCTACCTGGAGCCACATTGCAGTTAAGAAGCTAAACAACATGGTCAAAGAAAATGAAGAAGAGTTCAAAACAGAGGTAAGTACATTTGGTAGGACAAATCATAGGAATTTGATCCAACTCTTGGGATTTTGCAATGAGGGAGACCACAGAATGCTTGTATATGAGTTCATGAGCAAAGGTTCTTTGGCAAGCTTCCTTTTCGACACCACCGAAAGGCCTAGTTGGTTTCAGAGAATGCAGATAGCATTGGAGACAGCTAGGGGAATCTTGTATTTGCATGAAGAGTGTAGCACTCAGATCATACACTGTGACATTAAACCTCAAAATGTTTTGCTTGATGAATCTTTCACTGCTAAGATATCTGACTTTGGCTTAGCCAAACTTTTGAAAATTGGTCAATCTAGAACCACTACAAGGATAAGGGGAACCAAAGGGTATGTTGCCCCTGAGTGGTTTAGAAACATGCCAATTACCATCAAGGTTGATGTCTACAGTTATGGAGTGCTATTACTAGAGATCATTTGTTGCAGGAGGAGCTTTGAAGCAAATGCTGAGAATGAGAACCAGATGGTGCTGACAGATTGGGCCTATGATTGTTTTCATGAAAGGAAACTTGATTTATTGGTGAAAGATGACAAAGAGGCCTTAGCTGACATGAAGATGGTGGAAAAGTATGTGATGCTTTCTTTATGGTGCATTCAGGAGGATCCATTACTGAGGCCATCCATGAAGAAAATCTTGCAGATGCTTGAAGGGTCTATAGATGTACCAGCCCCTCCTGATTTACCTTCATTGATAACTACCATCAGTCTGTAG 2199 0.4197 MHAMMFLEQKYHLMFCFFLALLPFASVGQSHKNISLGSSHTAQAGDSTWAVSPSGNFAVGFQQIEENGFLLSIWFNQIPERTIVWSANGGNLAPKGSKVELTSDGFFLLNDPTGNRIWSAGSSGSGTSHAAMVDTGNFVLASQSTDDFSLVFNQSGVLFLRANNGSIISMISSKTASTQDFYQRAVLEYDGVFRHYAYPKSSNSNTRSWKMAWSTVYYLPPNICLDIREDYGSGACGFNSYCTFDDGKKSCHCPSGYSFIDPADVMKGCRPDFDSQSCDGSSPETDLFDFYEMENTDWPLTDYEYFEQANEDWCRQDCLSDCFCALAIFRDAGCWKKKLPFSNGRKDPSFQAKALLKIRKDNSTFKCEGPVRKKDQSKLIIVISVLLSSSVLMNLLLLVAGFSVVYWWRSKSSKANQPSQSIVGTCLRSFTFEELRKATNGFEEVLGQGAFSTVYKGVSFDPTWSHIAVKKLNNMVKENEEEFKTEVSTFGRTNHRNLIQLLGFCNEGDHRMLVYEFMSKGSLASFLFDTTERPSWFQRMQIALETARGILYLHEECSTQIIHCDIKPQNVLLDESFTAKISDFGLAKLLKIGQSRTTTRIRGTKGYVAPEWFRNMPITIKVDVYSYGVLLLEIICCRRSFEANAENENQMVLTDWAYDCFHERKLDLLVKDDKEALADMKMVEKYVMLSLWCIQEDPLLRPSMKKILQMLEGSIDVPAPPDLPSLITTISL* 733
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g0552 732 ProSiteProfiles Bulb-type lectin domain profile. 33 153 IPR001480 -
Amo14g0552 732 SUPERFAMILY alpha-D-mannose-specific plant lectins 69 161 IPR036426 -
Amo14g0552 732 ProSitePatterns Protein kinases ATP-binding region signature. 446 471 IPR017441 GO:0005524
Amo14g0552 732 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 145 725 - -
Amo14g0552 732 PIRSF SRK 142 731 IPR024171 GO:0004674
Amo14g0552 732 PIRSF SRK 2 155 IPR024171 GO:0004674
Amo14g0552 732 Pfam Protein kinase domain 443 709 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo14g0552 732 Gene3D - 31 147 IPR036426 -
Amo14g0552 732 SMART serkin_6 440 711 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo14g0552 732 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE RLK1 145 725 - -
Amo14g0552 732 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE RLK1 13 144 - -
Amo14g0552 732 SUPERFAMILY Protein kinase-like (PK-like) 415 712 IPR011009 -
Amo14g0552 732 SMART blect_4 33 149 IPR001480 -
Amo14g0552 732 Gene3D Transferase(Phosphotransferase) domain 1 518 722 - -
Amo14g0552 732 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 13 144 - -
Amo14g0552 732 ProSiteProfiles Protein kinase domain profile. 440 715 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo14g0552 732 CDD STKc_IRAK 446 713 - -
Amo14g0552 732 Gene3D Phosphorylase Kinase; domain 1 403 517 - -
Amo14g0552 732 ProSitePatterns Serine/Threonine protein kinases active-site signature. 561 573 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g0552 Amo-Chr14 7562249 7564666 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo14g0552 370 716 Receptor kinase-like Gene Family AT5G45780 39.286 7.40e-71 240
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Amo14g0552 Pkinase 2.6e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g0552 - - adu:107482645 1295.8