Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g0541 ATGGGGAAATCTTACCCAACCGTTAGTGCTGATTACCAGAAGGCCGTTGAGAAGGCGAAGAAGAAGCTCAGAGGTTTCATTGCTGAGAAGCGATGTGCTCCTTTGATGCTCCGTTTAGCATGGCACTCTGCCGGAACTTTTGATGTGGCTACAAAGAGTGGAGGTCCATTCGGAACCATTAAGCATCCATCCGAGCTTGCTCATGGCGCCAACGCTGGACTCGACATCGCTGTGAGGCTTTTGGAGCCGATCAAGGAGCAATTCCCTACGTTGTCCTACGCTGACTTTTACCAGTTGGCCGGTGTAGTTGCTGTTGAGATCACTGGTGGACCTGAAATTCCATTCCACCCTGGAAGAGAGGACAAGCCTGAGCCACCACCCGAGGGTCGCTTGCCCGATGCAACTAAGGGATCCGACCACTTGAGGGACGTGTTTGGCAAGGCTATGGGACTAAGTGATCAGGATATTGTTGCCCTGTCTGGTGTCACACTCTTGGAGCTGCACACAAGGAGCGTTCTGGCTTTGAAGGTCCTTGGACAAGCAATCCCCTCATCTTTGACAACTCTTACTTCAAGGAGCTTTTGA 585 0.5162 MGKSYPTVSADYQKAVEKAKKKLRGFIAEKRCAPLMLRLAWHSAGTFDVATKSGGPFGTIKHPSELAHGANAGLDIAVRLLEPIKEQFPTLSYADFYQLAGVVAVEITGGPEIPFHPGREDKPEPPPEGRLPDATKGSDHLRDVFGKAMGLSDQDIVALSGVTLLELHTRSVLALKVLGQAIPSSLTTLTSRSF* 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g0541 194 Pfam Peroxidase 20 162 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo14g0541 194 ProSitePatterns Peroxidases active site signature. 33 44 IPR019794 GO:0004601
Amo14g0541 194 PRINTS Haem peroxidase superfamily signature 33 47 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo14g0541 194 PRINTS Haem peroxidase superfamily signature 91 108 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo14g0541 194 PRINTS Haem peroxidase superfamily signature 109 121 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo14g0541 194 PANTHER L-ASCORBATE PEROXIDASE 1, CYTOSOLIC 1 165 - -
Amo14g0541 194 SUPERFAMILY Heme-dependent peroxidases 3 161 IPR010255 GO:0004601|GO:0006979|GO:0020037
Amo14g0541 194 ProSiteProfiles Plant heme peroxidase family profile. 74 169 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo14g0541 194 PANTHER THYLAKOID LUMENAL 29 KDA PROTEIN, CHLOROPLASTIC-RELATED 1 165 IPR044831 GO:0004601|GO:0034599
Amo14g0541 194 MobiDBLite consensus disorder prediction 115 137 - -
Amo14g0541 194 Gene3D - 2 142 - -
Amo14g0541 194 MobiDBLite consensus disorder prediction 112 137 - -
Amo14g0541 194 PRINTS Plant ascorbate peroxidase signature 12 32 IPR002207 GO:0004601|GO:0006979|GO:0020037
Amo14g0541 194 PRINTS Plant ascorbate peroxidase signature 33 48 IPR002207 GO:0004601|GO:0006979|GO:0020037
Amo14g0541 194 PRINTS Plant ascorbate peroxidase signature 90 108 IPR002207 GO:0004601|GO:0006979|GO:0020037
Amo14g0541 194 PRINTS Plant ascorbate peroxidase signature 130 147 IPR002207 GO:0004601|GO:0006979|GO:0020037
Amo14g0541 194 PRINTS Plant ascorbate peroxidase signature 109 121 IPR002207 GO:0004601|GO:0006979|GO:0020037
Amo14g0541 194 PRINTS Plant ascorbate peroxidase signature 65 89 IPR002207 GO:0004601|GO:0006979|GO:0020037
Amo14g0541 194 PRINTS Plant ascorbate peroxidase signature 149 170 IPR002207 GO:0004601|GO:0006979|GO:0020037
Amo14g0541 194 PRINTS Plant ascorbate peroxidase signature 51 61 IPR002207 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g0541 Amo-Chr14 7442063 7444854 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo14g0541 12 161 Peroxidase AT4G30170 27.711 9.76e-07 46.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g0541 K00434 - gmx:606508 313.538