Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g0536 ATGTCTCACATAGCTGTTGAGAGGAACAGGAGAAAGCAGATGAATGAACATCTCAAAGTTTTGAGATCCTTAACCCCATCTTTCTATATTAAAAGGGGAGATCAAGCGTCCATAATAGGGGGAGTTATAGAGTTCATCAAGGAGCTACACCAAGTGCTTCAAGCTTTGGAGTCCCAGAAAAGGAGAAAGAGCCTAAGCCCTAGCCCAGGCCCAAGCCCAAAAGCGCTGCAGCCGGCGTTTCAGCAGAACGATAGCCCCAGCGGAATGGGTGGTGGTTCCTTTAAGGAACTAGGAGCAAGTTGCAACTCTTCAGTTGCGGATGTGGAAGTTAAAATCTCAGGTTCTAATGTGATCCTGAGAGTAATTTCCCACAGGATTCCGGGTCAAGTTGCAAAGATCATTGCTGTTTTAGAAGCACTTTCCTTCGAAGTTCTTCATCTCAACATCAGTAGCATGGAGGATACAGTTCTCTACCATTTTGTTGTTAAGATAGGGCTGGAATGTGAACTGAGTCTGGAGGAACTAGCAATGGAAGTACAACAAAGCTTCTGCAGAGAGGCTATTATCACTGCGCTCTGA 579 0.4542 MSHIAVERNRRKQMNEHLKVLRSLTPSFYIKRGDQASIIGGVIEFIKELHQVLQALESQKRRKSLSPSPGPSPKALQPAFQQNDSPSGMGGGSFKELGASCNSSVADVEVKISGSNVILRVISHRIPGQVAKIIAVLEALSFEVLHLNISSMEDTVLYHFVVKIGLECELSLEELAMEVQQSFCREAIITAL* 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g0536 192 PANTHER TRANSCRIPTION FACTOR MUTE 1 190 - -
Amo14g0536 192 Pfam Helix-loop-helix DNA-binding domain 2 49 IPR011598 GO:0046983
Amo14g0536 192 SMART finulus 4 55 IPR011598 GO:0046983
Amo14g0536 192 MobiDBLite consensus disorder prediction 60 93 - -
Amo14g0536 192 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 1 49 IPR011598 GO:0046983
Amo14g0536 192 MobiDBLite consensus disorder prediction 75 89 - -
Amo14g0536 192 Gene3D - 1 64 IPR036638 GO:0046983
Amo14g0536 192 PANTHER TRANSCRIPTION FACTOR FAMA 1 190 IPR044283 GO:0003700|GO:0010052
Amo14g0536 192 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 1 67 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g0536 Amo-Chr14 7389769 7392319 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo14g0536 1 191 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G06120 65.500 5.37e-86 250
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Amo14g0536 HLH 1.8e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g0536 - - aip:107635887 307.375
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo14g0536 14 7389769 7392319 Amo14g0536 14 7389769 7392319 ECH