Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g0533 ATGACAAAACAGTGGAAGTCTGGTTGCCATGTCAAGCTAATTGCTGCCACATCTGCACACTTACCTTCCCATGTTTCATACGCCAATATTCACAGGTCCTTGGCTTACGGATTTGAGTTGTCATGGTTGCACATTCACTACCACCAGCATTGTAGATTTAGAACTTTCTACTTCAACCACACCACTCAGAATCCCTCCTTCTTTTCTCATTGTGACGCTCTCTTCGGAATTTCAATTTATTGCAAAGACACATCATCATATAAGAATATCGAGATATTCTTACAAAATAATAATAATCTGGTGTCAATAAAATATTCTGGTTTTGGTTCTGTATACAAAGAGAAGCTACGTAGTGGACCTTTTGTAGCAGTAAAGATATTAGATACATCTAAATCTAGTGAACAAGATTTCTTTAGTGAAATAATGACCATAGAAAGAATTCACCATATAAATGTGGTGAGATTGGTTGGATTTTGTGTCGAAGAATCAAAACGTGCTCTAATTTATGAGAAAATATATGAGATAACATTGGAAATTGCTAGAGGCATTTCTTACCTTCATGAAGAGTGTGACATGCAAATTTTGCACTTTGACATTAAACCACATAATATTCTTCTAGATAAAAATTTTATTCCTAAAGTTTATGATTTTCGATTAGCAAAATTATATCCTAGAGATAATAACATTGTTAGTTTGACCGATAGAAGAGGGACAATTGGATACACTGCATCCGAATTGTTTTATAACAATATCGGAGGAGTCTCGTACAAAGCTGATGTATATAGTTTTCGAATGTTGTTTATGGAAATGACAAACAGAAGGAAGAATTTGAATCCGCATGCAGAAAATTCAAGCAGCACATTATTTTCTGCTTGGATTTATAATCAATTCAGCAACAGCAGAGATATAGAAGTGCACAATATCACAGAAAATGAGAAGAACATATTTAAAAAAAATGATCATTGTTACACTATGATGTATCCAATTAAAATTCTCTGA 999 0.3353 MTKQWKSGCHVKLIAATSAHLPSHVSYANIHRSLAYGFELSWLHIHYHQHCRFRTFYFNHTTQNPSFFSHCDALFGISIYCKDTSSYKNIEIFLQNNNNLVSIKYSGFGSVYKEKLRSGPFVAVKILDTSKSSEQDFFSEIMTIERIHHINVVRLVGFCVEESKRALIYEKIYEITLEIARGISYLHEECDMQILHFDIKPHNILLDKNFIPKVYDFRLAKLYPRDNNIVSLTDRRGTIGYTASELFYNNIGGVSYKADVYSFRMLFMEMTNRRKNLNPHAENSSSTLFSAWIYNQFSNSRDIEVHNITENEKNIFKKNDHCYTMMYPIKIL* 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g0533 332 Pfam Protein tyrosine and serine/threonine kinase 108 170 IPR001245 GO:0004672|GO:0006468
Amo14g0533 332 ProSiteProfiles Protein kinase domain profile. 97 332 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo14g0533 332 Gene3D Phosphorylase Kinase; domain 1 78 165 - -
Amo14g0533 332 PANTHER RUST RESISTANCE KINASE LR10-RELATED 167 318 IPR045874 GO:0004672
Amo14g0533 332 Gene3D Transferase(Phosphotransferase) domain 1 166 327 - -
Amo14g0533 332 PANTHER RUST RESISTANCE KINASE LR10-RELATED 97 170 IPR045874 GO:0004672
Amo14g0533 332 PANTHER STRESS-INDUCED RECEPTOR-LIKE KINASE 167 318 - -
Amo14g0533 332 PANTHER STRESS-INDUCED RECEPTOR-LIKE KINASE 97 170 - -
Amo14g0533 332 Pfam Protein kinase domain 171 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo14g0533 332 SUPERFAMILY Protein kinase-like (PK-like) 83 280 IPR011009 -
Amo14g0533 332 SMART serkin_6 97 323 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo14g0533 332 ProSitePatterns Serine/Threonine protein kinases active-site signature. 194 206 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g0533 Amo-Chr14 7373009 7375762 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo14g0533 102 318 Receptor kinase-like Gene Family AT5G38260 42.798 6.62e-55 187
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Amo14g0533 Pkinase 3.3e-19 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g0533 - - vun:114195573 324.709