Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g0525 ATGGCTGAAAAGACCAGAGTAAATGCATTCGGACTTAGAATTTTGATAGGAACAATAATTTTTGTTGTTCTTATCATTTATCAATGGAGAAGAAGACACATGTCATCATATGAGAATATCGAGATATTCTTACAAAAAAATAATAATAATCTGGTGCCAATAAAATATTCAAAGCTACGCAGTGGACTTTTTGTAGCAATAAAGATATTAGATACATCTAAATCTAGTGAACAAGATTTCTTTAGTGAAATAATGGCCATCGGAAGAATTCACCATATAAATGTGGTGAGATTGGTTGAATTTTGTGTCGAAGGATCAAAATGTGCTCTAATATCATTGGAAATCACTAGAGGTATTTCTTACCTTCATGAAGGGTGTGACATGCAAATTTTGCACTTCGACATTAAACCACATAACATTCTTTTAGATGAAAATTTTATCCCAAAAGTTTCTGACTTTGGATTATCAAAATTATATCCTAGAGATAATAGCATTGTCAGTTTGATGGATAGAAGAGGGACAATTGGATACACTGCACCCAAATTATTTTACAACAATATCGGAGGAGTCTCGTACAAGGCTGATATATATAGTTTTGGAATGTTGTTGATGGAAATGGCAAACAGAAGGAAGAATTTGAATCTACATGCAGAGAATTCAAGCAGCACATTCTTTCCAACCTAA 684 0.3275 MAEKTRVNAFGLRILIGTIIFVVLIIYQWRRRHMSSYENIEIFLQKNNNNLVPIKYSKLRSGLFVAIKILDTSKSSEQDFFSEIMAIGRIHHINVVRLVEFCVEGSKCALISLEITRGISYLHEGCDMQILHFDIKPHNILLDENFIPKVSDFGLSKLYPRDNSIVSLMDRRGTIGYTAPKLFYNNIGGVSYKADIYSFGMLLMEMANRRKNLNLHAENSSSTFFPT* 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g0525 227 ProSiteProfiles Protein kinase domain profile. 1 227 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo14g0525 227 Gene3D Transferase(Phosphotransferase) domain 1 108 225 - -
Amo14g0525 227 PANTHER - 57 111 - -
Amo14g0525 227 Pfam Protein kinase domain 107 219 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo14g0525 227 PANTHER - 111 226 - -
Amo14g0525 227 PANTHER - 15 57 - -
Amo14g0525 227 Gene3D Phosphorylase Kinase; domain 1 42 107 - -
Amo14g0525 227 ProSitePatterns Serine/Threonine protein kinases active-site signature. 130 142 IPR008271 GO:0004672|GO:0006468
Amo14g0525 227 PANTHER RUST RESISTANCE KINASE LR10-RELATED 15 57 IPR045874 GO:0004672
Amo14g0525 227 PANTHER RUST RESISTANCE KINASE LR10-RELATED 57 111 IPR045874 GO:0004672
Amo14g0525 227 SUPERFAMILY Protein kinase-like (PK-like) 57 213 IPR011009 -
Amo14g0525 227 SMART serkin_6 37 225 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo14g0525 227 PANTHER RUST RESISTANCE KINASE LR10-RELATED 111 226 IPR045874 GO:0004672
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g0525 Amo-Chr14 7286183 7287036 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo14g0525 9 226 Receptor kinase-like Gene Family AT5G38260 37.276 3.18e-49 168
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Amo14g0525 Pkinase 1.3e-22 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g0525 - - aip:107619931 295.049