Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g0517 ATGATTATCTCGGTATCTGGCTCCTCAGCTTGCAAACAAGTACAAGAGCCTCTAGTAAGTTTCCAAAAGGGATTTACAAACATGTTATATAATCGGAACAATAATAATAAGGATAAGGTGGTGGTGATATTGGGGGCCACCGGAACCGGAAAGACCAAGTTGGCCATAGACCTTGCCAACCACTTCCCACCGGCTGAGATTGTTAACTCCGACAAAATGCAAGTCTACAAGGGCCTTGACATCACCACTAATAAGGTAACTCCTCAAGAGGCTCGTGGGGTCCCACATCATCTACTTGGCACACTTCACCCCAATGCCAACTTCACCGCCCTTGATTTTTGCCGCCAAGCCACCTCCGCCGTCGATTCCATCGTTGCCCGAGATGCCCTCCCCATCATCGCCGGTGGCTCCAATTCCTATCTTGATGCTCTCATCAACCACCACTCCACCTTTAGATTAAGGTATGAGTGTTGCTTCCTATGGGTGGATGTTTCAATCCCCATACTGCATGCGTCGCTTCGATCACGCGTGGATCGCATGATCGAAGCGGGACAAGTGGAGGAAGTGCGGAAATTCTTCGAGCCATTGGCAGATTACGAGAGGGGAATAAGAAGGGCGATAGGGGTGCCAGAGTTCAACGAGTTTCTAAGAGCAGAGGCCTTAGGAGCAGATGAAGAGACAAAGAAGATGCTCTTAGACATAGCCATTGCAAGAATCAAGGTCAACAACTGCACCCTCGCCAATCGCCAAATCCAGAAGATTCAACGACTCCACAACACGTGGAAGAGGACCATGCATCGCCTTGACGCCACGCAGGTTTTCTTGAACCGTAATTGCTCTGATCATCACCAATCTCAAAATTCCTGGGAGGAACATGTTCTTGCCAAGAGCCTTAGGATTCTTCACAAATTCCTCTACGAAGATAACAATAAACATCTTCTTGTTCCTTCCGGAATTAATGTTTCTTCTTCTTCGCCGCCGGTGGCAATGGCTGCCGTGGCGGCAGCTGCCACGCATTAG 1020 0.4892 MIISVSGSSACKQVQEPLVSFQKGFTNMLYNRNNNNKDKVVVILGATGTGKTKLAIDLANHFPPAEIVNSDKMQVYKGLDITTNKVTPQEARGVPHHLLGTLHPNANFTALDFCRQATSAVDSIVARDALPIIAGGSNSYLDALINHHSTFRLRYECCFLWVDVSIPILHASLRSRVDRMIEAGQVEEVRKFFEPLADYERGIRRAIGVPEFNEFLRAEALGADEETKKMLLDIAIARIKVNNCTLANRQIQKIQRLHNTWKRTMHRLDATQVFLNRNCSDHHQSQNSWEEHVLAKSLRILHKFLYEDNNKHLLVPSGINVSSSSPPVAMAAVAAAATH* 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g0517 339 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 25 312 IPR039657 -
Amo14g0517 339 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 41 151 IPR027417 -
Amo14g0517 339 Gene3D - 37 305 IPR027417 -
Amo14g0517 339 Gene3D Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 166 265 - -
Amo14g0517 339 PANTHER ADENYLATE ISOPENTENYLTRANSFERASE 5, CHLOROPLASTIC 25 312 - -
Amo14g0517 339 Pfam IPP transferase 153 252 - -
Amo14g0517 339 Pfam IPP transferase 74 148 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g0517 Amo-Chr14 7154075 7156430 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo14g0517 154 305 C2H2 Transcription Factor Family AT2G27760 29.213 1.09e-17 82.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g0517 K10760 - gmx:100812928 432.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo14g0517 14 7154075 7156430 Amo14g0517 14 7154075 7156430 ECH