Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g0506 ATGCTGCCTGATCAGAGAAAAAAGTCATCTGTGGAAGTAGACTTCTTTACTGAATATGGTGAAGGGAGCAGATACAGAATAGAGGAAGTAATTGGTAAAGGAAGCTATGGTGTTGTTTGTTCTGCATATGATTCTCACACAGGAGAAAAAGTTGCAATTAAGAAAATCAATGACATATTTGAACATGTTTCTGATGCTACTCGCATTCTTCGTGAGATTAAGCTTCTTAGACTCTTACGTCATCCGGATATTGTGGAGATCAAACATATTTTGTTACCACCTTCTAGAAGGGAATTCAAAGATATATATGTTGTTTTTGAACTCATGGAATCTGATTTGCATCAGGTCATCAAAGCAAATGATGATCTGACACCAGAGCATTACCAGTTTTTCCTCTATCAGCTTCTCCGAGGCTTGAAGTATATACATACAGCAAACGTTTTTCACCGAGACCTAAAGCCAAAAAACATTCTAGCAAATGCTGACTGCAAACTGAAGATTTGTGACTTTGGTCTTGCCAGAGTGGCTTTTAATGATACACCCACTGCCATATTCTGGACAGATTATGTTGCAACAAGGTGGTATAGGGCCCCTGAGCTGTGCGGATCCTTTTTTTCGAAGTATACACCAGCTATAGACATATGGAGCATTGGCTGCATTTTTGCAGAACTTTTGACTGGAAAGCCTCTTTTCCCTGGGAAGAATGTTGTCCATCAATTGGATCTCATGACTGATCTTCTTGGAACACCATCTCTTGAAGCCATTGCTAGGGTAAGGAATGAGAAAGCTCGGAGATACTTGAGCAGCATGCGCAAGAAGAAGCCAGTTCCTTTCTCCCAGAAGTTTCCTAATGCAGACCCCCTTGCTCTTCGTTTATTAGAAAGAATGCTGGCCTTTGAGCCTAAAGATCGGCCTTCTGCTGAAGAGGCGTTAGCGGATCCATATTTTAAAGGCTTGGCCAAGGTTGAGAGAGAACCTTCTGCCCAGCCAGTTACAAAGATGGAATTTGAGTTTGAGAGACGCAGGATAACAAAGGAAGATGTACGAGAACTTATATACCGTGAGATTCTAGAGTACCATCCAAAGATGTTAAAGGAATTTCTAGAGGGAGCAGAGCCAACAGGTTTCATGTATCCTAGTGCTGTGGACCACTTCAAGAAACAATTTGCATATCTTGAGGAGCATTACGGCAAAGGTGGAACTGTTGTTCCACCAGAGAGGCAACATGCATCGTTACCCAGACCATGTGTGTTGTATTCAGATAACTCGGTACAGAATACGGCTGAGGTGGCAAATGATCTATCCAAGTGTTGTATCAAAGAAGTTGAGAAACCACCCATGGATAGGAGCAGCGCTGTCCCTATGACTCGCCTTCCTTTGCAAGCTCCTCAAAATATTCAAGGTGCTGCGGCAAGGCCTGGAAAAGTTGTTGGTTCAGTAATACGCTACAACAACTGTGGGGTAGCAGTAACAGCAGAGACTGAGCAGCGGAGGGTTGTTAGGAATCCAACTGTTTCAGCTCAGTATGCTGCTTCGAGCTGCTCATATCCGAGGAGAAGCAACCCTAGCTGTAAAAATGAGAGGGCGGAAGATGATGGGATTGAAGGCTCGAACGGACTGCAGCCAAAGCCTCAATACATGGCAAGAAAAGTTGCAGCTGCTCAAGGAGGACCTGGTGGTCAATGGTATTGA 1692 0.4362 MLPDQRKKSSVEVDFFTEYGEGSRYRIEEVIGKGSYGVVCSAYDSHTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDLMTDLLGTPSLEAIARVRNEKARRYLSSMRKKKPVPFSQKFPNADPLALRLLERMLAFEPKDRPSAEEALADPYFKGLAKVEREPSAQPVTKMEFEFERRRITKEDVRELIYREILEYHPKMLKEFLEGAEPTGFMYPSAVDHFKKQFAYLEEHYGKGGTVVPPERQHASLPRPCVLYSDNSVQNTAEVANDLSKCCIKEVEKPPMDRSSAVPMTRLPLQAPQNIQGAAARPGKVVGSVIRYNNCGVAVTAETEQRRVVRNPTVSAQYAASSCSYPRRSNPSCKNERAEDDGIEGSNGLQPKPQYMARKVAAAQGGPGGQWY* 564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g0506 563 SMART serkin_6 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo14g0506 563 Pfam Protein kinase domain 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo14g0506 563 MobiDBLite consensus disorder prediction 514 545 - -
Amo14g0506 563 ProSiteProfiles Protein kinase domain profile. 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo14g0506 563 Gene3D Phosphorylase Kinase; domain 1 40 361 - -
Amo14g0506 563 Gene3D Transferase(Phosphotransferase) domain 1 111 339 - -
Amo14g0506 563 ProSitePatterns Protein kinases ATP-binding region signature. 31 55 IPR017441 GO:0005524
Amo14g0506 563 ProSitePatterns MAP kinase signature. 60 163 IPR003527 GO:0004707|GO:0005524|GO:0006468
Amo14g0506 563 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 9 478 - -
Amo14g0506 563 SUPERFAMILY Protein kinase-like (PK-like) 22 320 IPR011009 -
Amo14g0506 563 CDD STKc_TDY_MAPK 24 361 - -
Amo14g0506 563 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 9 478 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g0506 Amo-Chr14 7032247 7037715 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo14g0506 1 563 MAP Kinase Gene Family AT5G19010 80.348 0.0 943
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Amo14g0506 Pkinase 6e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g0506 - K04371 gmx:100781957 1074.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo14g0506 14 7032247 7037715 Amo14g0506 14 7032247 7037715 ECH
Amo01g3581 01 108587415 108591934 Amo14g0506 14 7032247 7037715 PCT
Amo11g2836 11 139219071 139223590 Amo14g0506 14 7032247 7037715 PCT
Amo14g0506 14 7032247 7037715 Amo01g3581 01 108587415 108591934 PCT
Amo14g0506 14 7032247 7037715 Amo11g2836 11 139219071 139223590 PCT